mhsmm

Package: mhsmm
Type: Package
Title: Inference for Hidden Markov and Semi-Markov Models
Version: 0.4.14
Date: 2014-01-08
Author: Jared O'Connell <jaredoconnell@gmail.com>, Søren Højsgaard
<sorenh@math.aau.dk>
Maintainer: Jared O'Connell <jaredoconnell@gmail.com>
Description: Parameter estimation and prediction for hidden Markov and semi-Markov models for data with multiple observation sequences. Suitable for equidistant time series data, with multivariate and/or missing data. Allows user defined emission distributions.
License: GPL (>= 2)
LazyLoad: yes
Depends: mvtnorm
Repository: CRAN
Encoding: latin1
NeedsCompilation: yes
Packaged: 2014-12-22 00:22:48 UTC; jared
Date/Publication: 2014-12-22 10:37:39

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'mhsmm' ...
** package 'mhsmm' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c hsmm.c -o hsmm.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o mhsmm.so hsmm.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/mhsmm/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'mhsmm'
    finding HTML links ... done
    addStates                               html  
    dmvnorm.hsmm                            html  
    dnorm.hsmm                              html  
    dpois.hsmm                              html  
    gammafit                                html  
    hmmfit                                  html  
    hmmspec                                 html  
    hsmmfit                                 html  
    hsmmspec                                html  
    mstep.mvnorm                            html  
    mstep.norm                              html  
    mstep.pois                              html  
    plot.hsmm                               html  
    plot.hsmm.data                          html  
    predict.hmm                             html  
    predict.hmmspec                         html  
    predict.hsmm                            html  
    predict.hsmmspec                        html  
    print.hmm                               html  
    print.hmmspec                           html  
    print.hsmmspec                          html  
    reproai                                 html  
    reprocows                               html  
    reproppa                                html  
    rmvnorm.hsmm                            html  
    rnorm.hsmm                              html  
    rpois.hsmm                              html  
    sim.mc                                  html  
    simulate.hmmspec                        html  
    simulate.hsmmspec                       html  
    smooth.discrete                         html  
    summary.hmm                             html  
    summary.hsmm                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (mhsmm)
Making 'packages.html' ... done