Last data update: 2014.03.03

miRNApath

Package: miRNApath
Type: Package
Title: miRNApath: Pathway Enrichment for miRNA Expression Data
Version: 1.32.0
Author: James M. Ward <jmw86069@gmail.com> with contributions
from Yunling Shi, Cindy Richards, John P. Cogswell
Maintainer: James M. Ward <jmw86069@gmail.com>
Description: This package provides pathway enrichment techniques
for miRNA expression data. Specifically, the set of
methods handles the many-to-many relationship between miRNAs
and the multiple genes they are predicted to target (and thus
affect.) It also handles the gene-to-pathway relationships
separately. Both steps are designed to preserve the additive
effects of miRNAs on genes, many miRNAs affecting one gene,
one miRNA affecting multiple genes, or many miRNAs affecting
many genes.
License: LGPL-2.1
biocViews: Annotation, Pathways, DifferentialExpression,
NetworkEnrichment, miRNA
Depends: methods, R (>= 2.7.0)
LazyLoad: Yes
NeedsCompilation: no
Packaged: 2016-05-04 03:09:04 UTC; biocbuild

● BiocViews: Annotation, DifferentialExpression, NetworkEnrichment, Pathways, miRNA
2 images, 10 functions, 1 datasets
● Reverse Depends: 0

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'miRNApath' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'miRNApath'
    finding HTML links ... done
    checkColumns                            html  
    convertFoldChange                       html  
    filtermirnapath                         html  
    loadmirnapath                           html  
    loadmirnapathways                       html  
    loadmirnatogene                         html  
    miRNApath-package                       html  
    mirnaTable                              html  
    mirnaobj                                html  
    mirnapath-class                         html  
    runEnrichment                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (miRNApath)
Making 'packages.html' ... done