Last data update: 2014.03.03

mixAK

Package: mixAK
Version: 4.2
Date: 2015-08-01
Title: Multivariate Normal Mixture Models and Mixtures of Generalized
Linear Mixed Models Including Model Based Clustering
Author: Arnošt Komárek <arnost.komarek@mff.cuni.cz>
Maintainer: Arnošt Komárek <arnost.komarek@mff.cuni.cz>
Depends: R (>= 3.0.0), colorspace, lme4 (>= 1.0)
Imports: graphics, stats, splines, fastGHQuad, mnormt, parallel, coda
Description: Contains a mixture of statistical methods including the MCMC methods to analyze normal mixtures. Additionally, model based clustering methods are implemented to perform classification based on (multivariate) longitudinal (or otherwise correlated) data. The basis for such clustering is a mixture of multivariate generalized linear mixed models.
Encoding: UTF-8
License: GPL (>= 3)
URL: http://msekce.karlin.mff.cuni.cz/~komarek
NeedsCompilation: yes
Packaged: 2015-08-01 21:12:19 UTC; komarek
Repository: CRAN
Date/Publication: 2015-08-02 08:23:15

● Cran Task View: Cluster, Survival
● 0 images, 71 functions, 9 datasets
● Reverse Depends: 0

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'mixAK' ...
** package 'mixAK' successfully unpacked and MD5 sums checked
** libs
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c AK_BLAS.cpp -o AK_BLAS.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c AK_BSTAT.cpp -o AK_BSTAT.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c AK_LAPACK.cpp -o AK_LAPACK.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c AK_Utils.cpp -o AK_Utils.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Dist_Dirichlet.cpp -o Dist_Dirichlet.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Dist_Discrete.cpp -o Dist_Discrete.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Dist_MVN.cpp -o Dist_MVN.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Dist_MVT.cpp -o Dist_MVT.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Dist_TMVN.cpp -o Dist_TMVN.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Dist_TNorm.cpp -o Dist_TNorm.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Dist_TmixMVN.cpp -o Dist_TmixMVN.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Dist_TmixNorm.cpp -o Dist_TmixNorm.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Dist_Wishart.cpp -o Dist_Wishart.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Dist_mixMVN.cpp -o Dist_mixMVN.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Dist_mixNorm.cpp -o Dist_mixNorm.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_Deviance.cpp -o GLMM_Deviance.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_Deviance2.cpp -o GLMM_Deviance2.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_Deviance2Pr_obs.cpp -o GLMM_Deviance2Pr_obs.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_MCMC.cpp -o GLMM_MCMC.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_NMixRelabel.cpp -o GLMM_NMixRelabel.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_PED.cpp -o GLMM_PED.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_copy_shift_eta_meanY_Zresp.cpp -o GLMM_copy_shift_eta_meanY_Zresp.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_create_SZitZiS.cpp -o GLMM_create_SZitZiS.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_create_SZitZiS_4longitDA.cpp -o GLMM_create_SZitZiS_4longitDA.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_create_XtX.cpp -o GLMM_create_XtX.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_create_ZS.cpp -o GLMM_create_ZS.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_create_ZiS.cpp -o GLMM_create_ZiS.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_dY_meanY.cpp -o GLMM_dY_meanY.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_eta_fixed_random2eta_meanY.cpp -o GLMM_eta_fixed_random2eta_meanY.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_fitted_Bernoulli_Logit.cpp -o GLMM_fitted_Bernoulli_Logit.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_fitted_Poisson_Log.cpp -o GLMM_fitted_Poisson_Log.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_linear_predictors.cpp -o GLMM_linear_predictors.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_longitDA.cpp -o GLMM_longitDA.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_longitDA2.cpp -o GLMM_longitDA2.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_longitPred_nmix_gauss.cpp -o GLMM_longitPred_nmix_gauss.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_newData.cpp -o GLMM_newData.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_scale_ZitZi.cpp -o GLMM_scale_ZitZi.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_updateFixEf.cpp -o GLMM_updateFixEf.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_updateHyperVars_eps.cpp -o GLMM_updateHyperVars_eps.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_updateRanEf.cpp -o GLMM_updateRanEf.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_updateRanEf_QR.cpp -o GLMM_updateRanEf_QR.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c GLMM_updateVars_eps.cpp -o GLMM_updateVars_eps.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c LogLik_Bernoulli_Logit.cpp -o LogLik_Bernoulli_Logit.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c LogLik_Gauss_Identity.cpp -o LogLik_Gauss_Identity.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c LogLik_Poisson_Log.cpp -o LogLik_Poisson_Log.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c MCMC_Moments_NormalApprox.cpp -o MCMC_Moments_NormalApprox.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c MCMC_Moments_NormalApprox_QR.cpp -o MCMC_Moments_NormalApprox_QR.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c MCMC_loglik_Zwork1_stres.cpp -o MCMC_loglik_Zwork1_stres.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Misc_findIndexOfPermutation.cpp -o Misc_findIndexOfPermutation.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Misc_generatePermutations.cpp -o Misc_generatePermutations.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_ChainsDerived.cpp -o NMix_ChainsDerived.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_Deviance.cpp -o NMix_Deviance.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_MCMC.cpp -o NMix_MCMC.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_NMixRelabel.cpp -o NMix_NMixRelabel.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_PED.cpp -o NMix_PED.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_PED_coreMulti.cpp -o NMix_PED_coreMulti.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_PED_coreUni.cpp -o NMix_PED_coreUni.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_PosterMeanMixParam.cpp -o NMix_PosterMeanMixParam.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_Pr_y_and_cum_Pr_y.cpp -o NMix_Pr_y_and_cum_Pr_y.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_PredCDFMarg.cpp -o NMix_PredCDFMarg.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_PredCondDensCDFMarg.cpp -o NMix_PredCondDensCDFMarg.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_PredCondDensJoint2.cpp -o NMix_PredCondDensJoint2.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_PredDA.cpp -o NMix_PredDA.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_PredDensJoint2.cpp -o NMix_PredDensJoint2.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_PredDensMarg.cpp -o NMix_PredDensMarg.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_RJMCMC_aux_vector_u.cpp -o NMix_RJMCMC_aux_vector_u.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_RJMCMC_logJacLambdaVSigma.cpp -o NMix_RJMCMC_logJacLambdaVSigma.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_RJMCMC_logJac_part3.cpp -o NMix_RJMCMC_logJac_part3.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_RJMCMCbirth.cpp -o NMix_RJMCMCbirth.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_RJMCMCcombine.cpp -o NMix_RJMCMCcombine.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_RJMCMCdeath.cpp -o NMix_RJMCMCdeath.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_RJMCMCsplit.cpp -o NMix_RJMCMCsplit.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_Stephens_costMatrix.cpp -o NMix_Stephens_costMatrix.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_Stephens_step1.cpp -o NMix_Stephens_step1.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_Stephens_step2_search.cpp -o NMix_Stephens_step2_search.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_Stephens_step2_transport.cpp -o NMix_Stephens_step2_transport.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_Utils.cpp -o NMix_Utils.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_fullCondMean_WeightsMeansVars.cpp -o NMix_fullCondMean_WeightsMeansVars.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_orderComp.cpp -o NMix_orderComp.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_reorder_Pr_y.cpp -o NMix_reorder_Pr_y.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_sum_Ir.cpp -o NMix_sum_Ir.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_updateAlloc.cpp -o NMix_updateAlloc.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_updateCensObs.cpp -o NMix_updateCensObs.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_updateHyperVars.cpp -o NMix_updateHyperVars.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_updateMeansVars.cpp -o NMix_updateMeansVars.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_updateWeights.cpp -o NMix_updateWeights.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c NMix_update_sum_Ir_and_sum_Pr_y.cpp -o NMix_update_sum_Ir_and_sum_Pr_y.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Rand_RotationMatrix.cpp -o Rand_RotationMatrix.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Rand_SamplePair.cpp -o Rand_SamplePair.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Stat_BLA.cpp -o Stat_BLA.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Stat_Quantile.cpp -o Stat_Quantile.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o mixAK.so AK_BLAS.o AK_BSTAT.o AK_LAPACK.o AK_Utils.o Dist_Dirichlet.o Dist_Discrete.o Dist_MVN.o Dist_MVT.o Dist_TMVN.o Dist_TNorm.o Dist_TmixMVN.o Dist_TmixNorm.o Dist_Wishart.o Dist_mixMVN.o Dist_mixNorm.o GLMM_Deviance.o GLMM_Deviance2.o GLMM_Deviance2Pr_obs.o GLMM_MCMC.o GLMM_NMixRelabel.o GLMM_PED.o GLMM_copy_shift_eta_meanY_Zresp.o GLMM_create_SZitZiS.o GLMM_create_SZitZiS_4longitDA.o GLMM_create_XtX.o GLMM_create_ZS.o GLMM_create_ZiS.o GLMM_dY_meanY.o GLMM_eta_fixed_random2eta_meanY.o GLMM_fitted_Bernoulli_Logit.o GLMM_fitted_Poisson_Log.o GLMM_linear_predictors.o GLMM_longitDA.o GLMM_longitDA2.o GLMM_longitPred_nmix_gauss.o GLMM_newData.o GLMM_scale_ZitZi.o GLMM_updateFixEf.o GLMM_updateHyperVars_eps.o GLMM_updateRanEf.o GLMM_updateRanEf_QR.o GLMM_updateVars_eps.o LogLik_Bernoulli_Logit.o LogLik_Gauss_Identity.o LogLik_Poisson_Log.o MCMC_Moments_NormalApprox.o MCMC_Moments_NormalApprox_QR.o MCMC_loglik_Zwork1_stres.o Misc_findIndexOfPermutation.o Misc_generatePermutations.o NMix_ChainsDerived.o NMix_Deviance.o NMix_MCMC.o NMix_NMixRelabel.o NMix_PED.o NMix_PED_coreMulti.o NMix_PED_coreUni.o NMix_PosterMeanMixParam.o NMix_Pr_y_and_cum_Pr_y.o NMix_PredCDFMarg.o NMix_PredCondDensCDFMarg.o NMix_PredCondDensJoint2.o NMix_PredDA.o NMix_PredDensJoint2.o NMix_PredDensMarg.o NMix_RJMCMC_aux_vector_u.o NMix_RJMCMC_logJacLambdaVSigma.o NMix_RJMCMC_logJac_part3.o NMix_RJMCMCbirth.o NMix_RJMCMCcombine.o NMix_RJMCMCdeath.o NMix_RJMCMCsplit.o NMix_Stephens_costMatrix.o NMix_Stephens_step1.o NMix_Stephens_step2_search.o NMix_Stephens_step2_transport.o NMix_Utils.o NMix_fullCondMean_WeightsMeansVars.o NMix_orderComp.o NMix_reorder_Pr_y.o NMix_sum_Ir.o NMix_updateAlloc.o NMix_updateCensObs.o NMix_updateHyperVars.o NMix_updateMeansVars.o NMix_updateWeights.o NMix_update_sum_Ir_and_sum_Pr_y.o Rand_RotationMatrix.o Rand_SamplePair.o Stat_BLA.o Stat_Quantile.o -L/home/ddbj/local/lib64/R/lib -lRlapack -L/home/ddbj/local/lib64/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/mixAK/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'mixAK'
    finding HTML links ... done
    Acidity                                 html  
    BLA                                     html  
    BsBasis                                 html  
    Dirichlet                               html  
    Enzyme                                  html  
    Faithful                                html  
    GLMMMCMC                                html  
    GLMMMCMCdata                            html  
    GLMMMCMCifit                            html  
    GLMMMCMCinit.alpha                      html  
    GLMMMCMCinit.b                          html  
    GLMMMCMCinit.eps                        html  
    GLMMMCMCprior.alpha                     html  
    GLMMMCMCprior.b                         html  
    GLMMMCMCprior.eps                       html  
    GLMMMCMCscale.b                         html  
    GLMMMCMCwrapper                         html  
    GLMMlongitDA                            html  
    GLMMlongitDA2                           html  
    Galaxy                                  html  
    MVN                                     html  
    MVNmixture                              html  
    MVT                                     html  
    MatMPpinv                               html  
    MatSqrt                                 html  
    NMixChainComp                           html  
    NMixChainsDerived                       html  
    NMixCluster                             html  
    NMixEM                                  html  
    NMixMCMC                                html  
    NMixMCMCdata                            html  
    NMixMCMCinitr                           html  
    NMixMCMCinity                           html  
    NMixMCMCwrapper                         html  
    NMixPlugCondDensJoint2                  html  
    NMixPlugCondDensMarg                    html  
    NMixPlugDA                              html  
    NMixPlugDensJoint2                      html  
    NMixPlugDensMarg                        html  
    NMixPredCDFMarg                         html  
    NMixPredCondCDFMarg                     html  
    NMixPredCondDensJoint2                  html  
    NMixPredCondDensMarg                    html  
    NMixPredDA                              html  
    NMixPredDensJoint2                      html  
    NMixPredDensMarg                        html  
    NMixPseudoGOF                           html  
    NMixRelabel                             html  
    NMixRelabelAlgorithm                    html  
    NMixSummComp                            html  
    PBC910                                  html  
    PBCseq                                  html  
    SP2Rect                                 html  
    SimData                                 html  
    TMVN                                    html  
    TNorm                                   html  
    Tandmob                                 html  
    TandmobEmer                             html  
    Wishart                                 html  
    Y2T                                     html  
    autolayout                              html  
    cbplot                                  html  
    fitted.GLMMMCMC                         html  
    generatePermutations                    html  
    getProfiles                             html  
    plot.NMixPlugCondDensJoint2             html  
    plot.NMixPlugCondDensMarg               html  
    plot.NMixPlugDensJoint2                 html  
    plot.NMixPlugDensMarg                   html  
    plot.NMixPredCDFMarg                    html  
    plot.NMixPredCondCDFMarg                html  
    plot.NMixPredCondDensJoint2             html  
    plot.NMixPredCondDensMarg               html  
    plot.NMixPredDensJoint2                 html  
    plot.NMixPredDensMarg                   html  
    plotProfiles                            html  
    rRotationMatrix                         html  
    rSamplePair                             html  
    summaryDiff                             html  
    tracePlots                              html  
** building package indices
** testing if installed package can be loaded
* DONE (mixAK)
Making 'packages.html' ... done