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Last data update: 2014.03.03
mritc

Package: mritc
Title: MRI Tissue Classification
Version: 0.5-0
Author: Dai Feng and Luke Tierney
Description: Various methods for MRI tissue classification.
Maintainer: Dai Feng <dai_feng@merck.com>
Depends: R (>= 2.14.0), lattice (>= 0.18-8), misc3d (>= 0.8-1),
oro.nifti (>= 0.4.0)
Suggests: tkrplot (>= 0.0-23)
License: GPL
Packaged: 2015-01-05 01:56:48 UTC; fengd
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2015-01-05 07:45:02
● Cran Task View: Cluster
● 0 images, 12 functions, 0 datasets
● Reverse Depends: 0
Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'mritc' ...
** package 'mritc' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2  -c getDenSubBias_omp.c -o getDenSubBias_omp.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2  -c getDenSub_omp.c -o getDenSub_omp.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2  -c updateBiasInde_omp.c -o updateBiasInde_omp.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2  -c updateBiasWeights_omp.c -o updateBiasWeights_omp.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2  -c updateCounts.c -o updateCounts.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2  -c updateDistanceUnit_omp.c -o updateDistanceUnit_omp.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2  -c updateIndicesHMRFEM.c -o updateIndicesHMRFEM.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2  -c updateIndices_omp.c -o updateIndices_omp.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2  -c updateSmoothWeights.c -o updateSmoothWeights.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2  -c updateY.c -o updateY.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2  -c updateYBias.c -o updateYBias.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2  -c yIndicesSummaries.c -o yIndicesSummaries.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2  -c yIndicesSummariesBias.c -o yIndicesSummariesBias.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o mritc.so getDenSubBias_omp.o getDenSub_omp.o updateBiasInde_omp.o updateBiasWeights_omp.o updateCounts.o updateDistanceUnit_omp.o updateIndicesHMRFEM.o updateIndices_omp.o updateSmoothWeights.o updateY.o updateYBias.o yIndicesSummaries.o yIndicesSummariesBias.o -fopenmp -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/mritc/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'mritc'
    finding HTML links ... done
    emnormmix                               html  
    initNormMix                             html  
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/initNormMix.Rd:20: missing file link 'initProp'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/initNormMix.Rd:32: missing file link 'initOtsu'
    makeMRIspatial                          html  
    measureMRI                              html  
    mritc-package                           html  
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc-package.Rd:101: missing file link 'mritc.em'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc-package.Rd:101: missing file link 'mritc.icm'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc-package.Rd:102: missing file link 'mritc.hmrfem'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc-package.Rd:103: missing file link 'mritc.bayes'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc-package.Rd:112: missing file link 'mritc.pvhmrfem'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc-package.Rd:118: missing file link 'mritc.em'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc-package.Rd:118: missing file link 'mritc.icm'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc-package.Rd:119: missing file link 'mritc.hmrfem'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc-package.Rd:119: missing file link 'mritc.bayes'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc-package.Rd:124: missing file link 'initOtsu'
    mritc                                   html  
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:38: missing file link 'initOtsu'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:41: missing file link 'initOtsu'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:44: missing file link 'initOtsu'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:48: missing file link 'mritc.em'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:48: missing file link 'mritc.icm'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:49: missing file link 'mritc.hmrfem'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:50: missing file link 'mritc.pvhmrfem'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:51: missing file link 'mritc.em'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:57: missing file link 'mritc.em'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:58: missing file link 'mritc.icm'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:58: missing file link 'mritc.hmrfem'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:59: missing file link 'mritc.pvhmrfem'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:70: missing file link 'mritc.icm'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:71: missing file link 'mritc.hmrfem'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:72: missing file link 'mritc.bayes'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:75: missing file link 'mritc.pvhmrfem'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:79: missing file link 'mritc.icm'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:80: missing file link 'mritc.hmrfem'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:81: missing file link 'mritc.pvhmrfem'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:82: missing file link 'mritc.bayes'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:87: missing file link 'mritc.bayes'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:106: missing file link 'mritc.bayes'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:126: missing file link 'mritc.em'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:127: missing file link 'mritc.icm'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:127: missing file link 'mritc.hmrfem'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:128: missing file link 'mritc.pvhmrfem'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:128: missing file link 'mritc.bayes'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/mritc.Rd:135: missing file link 'initOtsu'
    plot.mritc                              html  
    print.mritc                             html  
    readMRI                                 html  
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/readMRI.Rd:26: missing file link 'readANALYZE'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/readMRI.Rd:28: missing file link 'readNIfTI'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/readMRI.Rd:31: missing file link 'readANALYZE'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/readMRI.Rd:32: missing file link 'readNIfTI'
    rnormmix                                html  
    summary.mritc                           html  
    writeMRI                                html  
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/writeMRI.Rd:27: missing file link 'writeANALYZE'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/writeMRI.Rd:29: missing file link 'writeNIfTI'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/writeMRI.Rd:32: missing file link 'writeANALYZE'
Rd warning: /tmp/RtmpjxbMjR/R.INSTALL107b23bfce1e/mritc/man/writeMRI.Rd:33: missing file link 'writeNIfTI'
** building package indices
** testing if installed package can be loaded
* DONE (mritc)
Making 'packages.html' ... done