msmsEDA

Package: msmsEDA
Type: Package
Title: Exploratory Data Analysis of LC-MS/MS data by spectral counts
Version: 1.10.0
Date: 2014-01-19
Author: Josep Gregori, Alex Sanchez, and Josep Villanueva
Maintainer: Josep Gregori <josep.gregori@gmail.com>
Depends: R (>= 3.0.1), MSnbase
Imports: MASS, gplots, RColorBrewer
Description: Exploratory data analysis to assess the quality of a set of LC-MS/MS experiments, and visualize de influence of the involved factors.
License: GPL-2
Encoding: latin1
biocViews: Software, MassSpectrometry, Proteomics
NeedsCompilation: no
Packaged: 2016-05-04 05:01:37 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'msmsEDA' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'msmsEDA'
    finding HTML links ... done
    batch.neutralize                        html  
    finding level-2 HTML links ... done

    count.stats                             html  
    counts.hc                               html  
    counts.heatmap                          html  
    counts.pca                              html  
    disp.estimates                          html  
    filter.flags                            html  
    gene.table                              html  
    msms.dataset                            html  
    msmsEDA-package                         html  
    norm.counts                             html  
    pnms                                    html  
    pp.msms.data                            html  
    spc.barplots                            html  
    spc.boxplots                            html  
    spc.densityplots                        html  
    spc.scatterplot                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (msmsEDA)
Making 'packages.html' ... done