mvSLOUCH

Package: mvSLOUCH
Type: Package
Title: Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for
Phylogenetic Comparative Hypotheses
Version: 1.3.2
Date: 2015-07-16
Author: Krzysztof Bartoszek <bartoszekkj@gmail.com>
Maintainer: Krzysztof Bartoszek <bartoszekkj@gmail.com>
Description: Fits multivariate Ornstein-Uhlenbeck types of models to continues trait data from species related by a common evolutionary history.
Depends: R (>= 2.9.1), ouch, ape, numDeriv, mvtnorm, corpcor
License: GPL (>= 2) | file LICENCE
LazyLoad: yes
Collate: regimes.R treeDists.R grid.R matrixexps.R
matrixparametrizations.R modelparamstransform.R precalcs.R
sdemoments.R sdemomentsphyl.R loglik.R ci.R phylgls.R
modelparamssummary.R modelparams.R estimBM.R estimGLSGC.R
estimMAXLIK.R simulVasicekproc.R simulVasicekprocphyl.R
PhyloSDEestim.R MVslouchSimulStudy.R wrappers.R fitch.mvsl.R
ouch2slouch.mvsl.R make.states.mvsl.R evolmodelest.R getESS.R
Imports: methods
Packaged: 2016-06-06 16:58:03 UTC; bart
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2016-06-06 20:25:26

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'mvSLOUCH' ...
** package 'mvSLOUCH' successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'mvSLOUCH'
    finding HTML links ... done
    BrownianMotionModel                     html  
    SummarizeBM                             html  
    SummarizeMVSLOUCH                       html  
    SummarizeOUCH                           html  
    drawPhylProcess                         html  
    estimate.evolutionary.model             html  
    fitch.mvsl                              html  
    generate.model.setups                   html  
    mvSLOUCH-internal                       html  
    mvSLOUCH-package                        html  
    mvslouchModel                           html  
    ouchModel                               html  
    simulBMProcPhylTree                     html  
    simulMVSLOUCHProcPhylTree               html  
    simulOUCHProcPhylTree                   html  
** building package indices
** testing if installed package can be loaded
* DONE (mvSLOUCH)
Making 'packages.html' ... done