netgsa

Package: netgsa
Type: Package
Title: Network-Based Gene Set Analysis
Version: 3.0
Date: 2016-06-15
Author: Ali Shojaie and Jing Ma
Maintainer: Jing Ma <jinma@upenn.edu>
Description: Carry out Network-based Gene Set Analysis by incorporating external information about interactions among genes, as well as novel interactions learned from data.
Depends: corpcor, Matrix, glasso, glmnet, igraph
Suggests: MASS
License: GPL (>= 2)
LazyLoad: yes
URL: http://arxiv.org/abs/1411.7919
NeedsCompilation: no
Packaged: 2016-06-16 15:41:43 UTC; jingma
Repository: CRAN
Date/Publication: 2016-06-16 18:27:48

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'netgsa' ...
** package 'netgsa' successfully unpacked and MD5 sums checked
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'netgsa'
    finding HTML links ... done
    NetGSA                                  html  
    bic.netEst.undir                        html  
    edgelist                                html  
    edgelist2adj                            html  
    netEst.dir                              html  
    finding level-2 HTML links ... done

    netEst.undir                            html  
    netgsa-package                          html  
    netgsaex2                               html  
    netgsaex3                               html  
    netgsaexDAG                             html  
    nonedgelist                             html  
** building package indices
** testing if installed package can be loaded
* DONE (netgsa)
Making 'packages.html' ... done