onlinePCA

Package: onlinePCA
Type: Package
Title: Online Principal Component Analysis
Version: 1.3
Date: 2015-10-29
Author: David Degras [aut, cre], Herve Cardot [ctb]
Maintainer: David Degras <ddegrasv@gmail.com>
Description: Online PCA for multivariate and functional data using perturbation methods, low-rank incremental methods, and stochastic optimization methods.
License: GPL-3
Depends: R (>= 3.0.2), rARPACK
Imports: Rcpp (>= 0.11.4), splines, stats
LinkingTo: Rcpp, RcppArmadillo
URL: http://cran.r-project.org/package=onlinePCA
Repository: CRAN
NeedsCompilation: yes
Packaged: 2015-10-28 23:32:37 UTC; David
Date/Publication: 2015-10-29 08:29:55

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'onlinePCA' ...
** package 'onlinePCA' successfully unpacked and MD5 sums checked
** libs
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG `/home/ddbj/local/lib64/R/bin/Rscript -e "Rcpp:::CxxFlags()"` -g  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include"   -fpic  -g -O2  -c RcppExports.cpp -o RcppExports.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG `/home/ddbj/local/lib64/R/bin/Rscript -e "Rcpp:::CxxFlags()"` -g  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include"   -fpic  -g -O2  -c ccipca.cpp -o ccipca.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG `/home/ddbj/local/lib64/R/bin/Rscript -e "Rcpp:::CxxFlags()"` -g  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include"   -fpic  -g -O2  -c sga_ghapca.cpp -o sga_ghapca.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o onlinePCA.so RcppExports.o ccipca.o sga_ghapca.o -L/home/ddbj/local/lib64/R/lib -lRlapack -L/home/ddbj/local/lib64/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/onlinePCA/libs
** R
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'onlinePCA'
    finding HTML links ... done
    batchpca                                html  
Rd warning: /tmp/RtmpoP1cu6/R.INSTALL2e011f55dde3/onlinePCA/man/batchpca.Rd:22: missing file link 'eigs_sym'
    bsoipca                                 html  
    ccipca                                  html  
    coef2fd                                 html  
    create.basis                            html  
    fd2coef                                 html  
    ghapca                                  html  
    impute                                  html  
    incRpca                                 html  
    incRpca.block                           html  
    incRpca.rc                              html  
    onlinePCA-package                       html  
    perturbationRpca                        html  
    secularRpca                             html  
    sgapca                                  html  
    snlpca                                  html  
    updateCovariance                        html  
    updateMean                              html  
** building package indices
** testing if installed package can be loaded
* DONE (onlinePCA)
Making 'packages.html' ... done