ordinal

Package: ordinal
Type: Package
Title: Regression Models for Ordinal Data
Version: 2015.6-28
Date: 2015-06-28
Authors@R: person(given="Rune Haubo Bojesen", family="Christensen",
email="rune.haubo@gmail.com", role=c("aut", "cre"))
LazyData: true
ByteCompile: yes
Depends: R (>= 2.13.0), methods
Imports: ucminf, MASS, Matrix
Suggests: lme4, nnet, xtable, testthat (>= 0.8)
Description: Implementation of cumulative link (mixed) models also known
as ordered regression models, proportional odds models, proportional
hazards models for grouped survival times and ordered logit/probit/...
models. Estimation is via maximum likelihood and mixed models are fitted
with the Laplace approximation and adaptive Gauss-Hermite quadrature.
Multiple random effect terms are allowed and they may be nested, crossed or
partially nested/crossed. Restrictions of symmetry and equidistance can be
imposed on the thresholds (cut-points/intercepts). Standard model
methods are available (summary, anova, drop-methods, step,
confint, predict etc.) in addition to profile methods and slice
methods for visualizing the likelihood function and checking
convergence.
License: GPL (>= 2)
Packaged: 2015-06-28 11:21:15 UTC; rhbc
Author: Rune Haubo Bojesen Christensen [aut, cre]
Maintainer: Rune Haubo Bojesen Christensen <rune.haubo@gmail.com>
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2015-06-28 16:50:54

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'ordinal' ...
** package 'ordinal' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c get_fitted.c -o get_fitted.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c links.c -o links.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c utilityFuns.c -o utilityFuns.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o ordinal.so get_fitted.o links.o utilityFuns.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/ordinal/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ordinal'
    finding HTML links ... done
    VarCorr                                 html  
    addtermOld                              html  
Rd warning: /tmp/RtmpUtKDaG/R.INSTALL67314d93eb15/ordinal/man/addtermOld.Rd:71: missing file link 'clm2'
    anovaOld                                html  
Rd warning: /tmp/RtmpUtKDaG/R.INSTALL67314d93eb15/ordinal/man/anovaOld.Rd:48: missing file link 'clm2'
    clm                                     html  
    clm.control                             html  
    finding level-2 HTML links ... done

    clm.controlOld                          html  
    clm.fit                                 html  
    clmOld                                  html  
    clmm                                    html  
    clmm.control                            html  
    clmm.controlOld                         html  
    clmmOld                                 html  
    confint.clm                             html  
    confint.clmmOld                         html  
    confintOld                              html  
    convergence.clm                         html  
    dropCoef                                html  
    gfun                                    html  
    gumbel                                  html  
    income                                  html  
    lgamma                                  html  
    nominal.test                            html  
    ordinal-package                         html  
    predict                                 html  
    predictOld                              html  
Rd warning: /tmp/RtmpUtKDaG/R.INSTALL67314d93eb15/ordinal/man/predictOld.Rd:40: missing file link 'clm2'
Rd warning: /tmp/RtmpUtKDaG/R.INSTALL67314d93eb15/ordinal/man/predictOld.Rd:40: missing file link 'clmm2'
    ranef                                   html  
    slice.clm                               html  
    soup                                    html  
    updateOld                               html  
    wine                                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (ordinal)
Making 'packages.html' ... done