Last data update: 2014.03.03
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pasillaBamSubset
Package: pasillaBamSubset
Title: Subset of BAM files from "Pasilla" experiment
Description: Subset of BAM files untreated1.bam (single-end reads) and
untreated3.bam (paired-end reads) from "Pasilla" experiment
(Pasilla knock-down by Brooks et al., Genome Research 2011).
See the vignette in the pasilla data package for how BAM files
untreated1.bam and untreated3.bam were obtained from the RNA-Seq
read sequence data that is provided by NCBI Gene Expression Omnibus
under accession numbers GSM461176 to GSM461181. Also contains
the DNA sequence for fly chromosome 4 to which the reads can
be mapped.
Version: 0.10.0
Author: H. Pages
Maintainer: H. Pages <hpages@fhcrc.org>
biocViews: ExperimentData, Genome, DNASeqData, RNASeqData
Suggests: pasilla
License: LGPL
NeedsCompilation: no
Packaged: 2016-05-07 20:24:17 UTC; biocbuild
● BiocViews: DNASeqData, ExperimentData, Genome, RNASeqData
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0 images,
1 functions,
0 datasets
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Reverse Depends: 0
Install log
* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'pasillaBamSubset' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'pasillaBamSubset'
finding HTML links ... done
pasillaBamSubset-package html
** building package indices
** testing if installed package can be loaded
* DONE (pasillaBamSubset)
Making 'packages.html' ... done
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