pbdMPI

Package: pbdMPI
Version: 0.3-1
Date: 2015-12-30
Title: Programming with Big Data -- Interface to MPI
Authors@R: c(person("Wei-Chen", "Chen", role = c("aut", "cre"), email =
"wccsnow@gmail.com"),
person("George", "Ostrouchov", role = "aut"),
person("Drew", "Schmidt", role = "aut"),
person("Pragneshkumar", "Patel", role = "aut"),
person("Hao", "Yu", role = "aut"),
person("Christian", "Heckendorf", role = "ctb", comment = "FreeBSD"),
person("Brian", "Ripley", role = "ctb", comment = "Windows HPC Pack
2012"),
person("R Core team", role = "ctb", comment = "some functions are
modified from the base packages"))
Depends: R (>= 3.0.0), methods, rlecuyer
Enhances: pbdPROF, pbdZMQ
LazyLoad: yes
LazyData: yes
Description: An efficient interface to MPI by utilizing S4
classes and methods with a focus on Single Program/Multiple Data ('SPMD')
parallel programming style, which is intended for batch parallel
execution.
SystemRequirements: OpenMPI (>= 1.5.4) on Solaris, Linux, Mac, and
FreeBSD. MS-MPI (Microsoft HPC Pack 2012 R2 MS-MPI
Redistributable Package) on Windows.
License: Mozilla Public License 2.0
URL: http://r-pbd.org/
BugReports: http://group.r-pbd.org/
MailingList: Please send questions and comments regarding pbdR to
RBigData@gmail.com
NeedsCompilation: yes
Packaged: 2016-01-21 02:14:12 UTC; snoweye
Author: Wei-Chen Chen [aut, cre],
George Ostrouchov [aut],
Drew Schmidt [aut],
Pragneshkumar Patel [aut],
Hao Yu [aut],
Christian Heckendorf [ctb] (FreeBSD),
Brian Ripley [ctb] (Windows HPC Pack 2012),
R Core team [ctb] (some functions are modified from the base packages)
Maintainer: Wei-Chen Chen <wccsnow@gmail.com>
Repository: CRAN
Date/Publication: 2016-01-21 08:26:43

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'pbdMPI' ...
** package 'pbdMPI' successfully unpacked and MD5 sums checked
checking for sed... /bin/sed
checking for mpicc... F
checking for ompi_info... ompi_info
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking mpi.h usability... no
checking mpi.h presence... no
checking for mpi.h... no
configure: error: "Cannot find mpi.h header file"
ERROR: configuration failed for package 'pbdMPI'
* removing '/home/ddbj/local/lib64/R/library/pbdMPI'