Last data update: 2014.03.03
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prodlim
Package: prodlim
Title: Product-Limit Estimation for Censored Event History Analysis
Version: 1.5.7
Author: Thomas A. Gerds
Description: Fast and user friendly implementation of nonparametric estimators
for censored event history (survival) analysis. Kaplan-Meier and
Aalen-Johansen method.
Depends: R (>= 2.9.0)
Imports: Rcpp (>= 0.11.5), stats, graphics, survival, KernSmooth, lava
LinkingTo: Rcpp
Maintainer: Thomas A. Gerds <tag@biostat.ku.dk>
License: GPL (>= 2)
Packaged: 2015-12-19 09:43:23 UTC; tag
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2015-12-19 16:15:24
Install log
* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'prodlim' ...
** package 'prodlim' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c GMLE.c -o GMLE.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c IntIndex.c -o IntIndex.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c icens_prodlim.c -o icens_prodlim.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c icens_prodlim_ml.c -o icens_prodlim_ml.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c iindex.c -o iindex.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c life_table.c -o life_table.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c loo.c -o loo.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c neighborhood.c -o neighborhood.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c predict.c -o predict.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c predict_individual_survival.c -o predict_individual_survival.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c prodlim.c -o prodlim.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c prodlim_clustersurv.c -o prodlim_clustersurv.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c prodlim_comprisk.c -o prodlim_comprisk.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c prodlim_multistates.c -o prodlim_multistates.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c prodlim_surv.c -o prodlim_surv.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c sindex.c -o sindex.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c summary_prodlim.c -o summary_prodlim.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o prodlim.so GMLE.o IntIndex.o icens_prodlim.o icens_prodlim_ml.o iindex.o life_table.o loo.o neighborhood.o predict.o predict_individual_survival.o prodlim.o prodlim_clustersurv.o prodlim_comprisk.o prodlim_multistates.o prodlim_surv.o sindex.o summary_prodlim.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/prodlim/libs
** R
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'prodlim'
finding HTML links ... done
EventHistory.frame html
Hist html
List2Matrix html
PercentAxis html
SimCompRisk html
SimSurv html
SmartControl html
atRisk html
backGround html
clusterTestData html
confInt html
crModel html
dimColor html
getEvent html
getStates html
jackknife html
leaveOneOut html
markTime html
meanNeighbors html
model.design html
neighborhood html
parseSpecialNames html
plot.Hist html
plot.prodlim html
plotCompetingRiskModel html
plotIllnessDeathModel html
predict.prodlim html
predictSurvIndividual html
print.prodlim html
prodlim html
quantile.prodlim html
redist html
row.match html
sindex html
stopTime html
strip.terms html
summary.Hist html
summary.prodlim html
survModel html
** building package indices
** testing if installed package can be loaded
* DONE (prodlim)
Making 'packages.html' ... done
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