sda

Package: sda
Version: 1.3.7
Date: 2015-07-08
Title: Shrinkage Discriminant Analysis and CAT Score Variable Selection
Author: Miika Ahdesmaki, Verena Zuber, Sebastian Gibb, and Korbinian Strimmer
Maintainer: Korbinian Strimmer <strimmerlab@gmail.com>
Depends: R (>= 3.0.2), entropy (>= 1.2.1), corpcor (>= 1.6.8), fdrtool
(>= 1.2.15)
Suggests: crossval (>= 1.0.3)
Imports: graphics, stats, utils
Description: Provides an efficient framework for
high-dimensional linear and diagonal discriminant analysis with
variable selection. The classifier is trained using James-Stein-type
shrinkage estimators and predictor variables are ranked using
correlation-adjusted t-scores (CAT scores). Variable selection error
is controlled using false non-discovery rates or higher criticism.
License: GPL (>= 3)
URL: http://strimmerlab.org/software/sda/
Packaged: 2015-07-08 13:33:12 UTC; strimmer
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-07-08 16:28:41

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'sda' ...
** package 'sda' successfully unpacked and MD5 sums checked
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'sda'
    finding HTML links ... done
    catscore                                html  
    centroids                               html  
Rd warning: /tmp/RtmpPruHhw/R.INSTALL59287508b023/sda/man/centroids.Rd:34: missing file link 'freqs.shrink'
    khan2001                                html  
Rd warning: /tmp/RtmpPruHhw/R.INSTALL59287508b023/sda/man/khan2001.Rd:35: missing file link 'log'
    predict.sda                             html  
    sda-internal                            html  
    sda                                     html  
    sda.package                             html  
    sda.ranking                             html  
    singh2002                               html  
** building package indices
** testing if installed package can be loaded
* DONE (sda)
Making 'packages.html' ... done