simulatorZ

Package: simulatorZ
Type: Package
Title: Simulator for Collections of Independent Genomic Data Sets
Version: 1.6.0
Date: 2014-08-03
Author: Yuqing Zhang, Christoph Bernau, Levi Waldron
Maintainer: Yuqing Zhang <zhangyuqing.pkusms@gmail.com>
Description: simulatorZ is a package intended primarily to simulate
collections of independent genomic data sets, as well as
performing training and validation with predicting algorithms.
It supports ExpressionSet and RangedSummarizedExperiment objects.
License: Artistic-2.0
Depends: R (>= 3.1), methods, BiocGenerics, Biobase,
SummarizedExperiment, survival, CoxBoost
Imports: graphics, stats, gbm, Hmisc, S4Vectors, IRanges, GenomicRanges
Suggests: RUnit, BiocStyle, curatedOvarianData, parathyroidSE, superpc
URL: https://github.com/zhangyuqing/simulatorZ
BugReports: https://github.com/zhangyuqing/simulatorZ
biocViews: Survival
NeedsCompilation: yes
Packaged: 2016-05-04 05:47:44 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'simulatorZ' ...
** libs
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c coxformatrices.cpp -o coxformatrices.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o simulatorZ.so coxformatrices.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/simulatorZ/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'simulatorZ'
    finding HTML links ... done
    cvSubsets                               html  
    funCV                                   html  
    geneFilter                              html  
    getTrueModel                            html  
    masomenos                               html  
    plusMinus                               html  
    rowCoxTests                             html  
    simBootstrap                            html  
    simData                                 html  
    simTime                                 html  
    simulatorZ-package                      html  
    zmatrix                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (simulatorZ)
Making 'packages.html' ... done