skatMeta

Package: skatMeta
Type: Package
Title: Efficient meta analysis for the SKAT test
Version: 1.4.3
Date: 2012-11-21
Author: Arend Voorman, Jennifer Brody, Thomas Lumley
Maintainer: Arend Voorman <voorma@uw.edu>
Depends: R (>= 2.10), Matrix, coxme, survival, CompQuadForm
Suggests: SKAT, kinship2
Description: Computes necessary information to meta analyze SKAT
statistics in each individual cohort, and then performs the
meta analysis.
License: GPL (>= 2)
Packaged: 2013-06-04 02:06:18 UTC; arie
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2013-06-04 08:07:42

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'skatMeta' ...
** package 'skatMeta' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c chinv2.c -o chinv2.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c cholesky2.c -o cholesky2.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c chsolve2.c -o chsolve2.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c coxfit6.c -o coxfit6.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c coxsafe.c -o coxsafe.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c dmatrix.c -o dmatrix.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o skatMeta.so chinv2.o cholesky2.o chsolve2.o coxfit6.o coxsafe.o dmatrix.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/skatMeta/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'skatMeta'
    finding HTML links ... done
    SNPInfo                                 html  
    burdenMeta                              html  
    singlesnpMeta                           html  
    skatCohort                              html  
    skatCohortAdj                           html  
    skatExample                             html  
    skatMeta                                html  
    skatOMeta                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (skatMeta)
Making 'packages.html' ... done