R Graphical Manual

Browse All

Last data update: 2014.03.03

spBayes

Package: spBayes
Version: 0.3-9
Date: 2015-1-26
Title: Univariate and Multivariate Spatial-temporal Modeling
Author: Andrew O. Finley <finleya@msu.edu>, Sudipto Banerjee
<sudiptob@biostat.umn.edu>
Maintainer: Andrew O. Finley <finleya@msu.edu>
Depends: R (>= 1.8.0), coda, magic, abind, Formula
Suggests: MBA, geoR
Description: Fits univariate and multivariate spatio-temporal
models with Markov chain Monte Carlo (MCMC).
License: GPL (>= 2)
URL: http://blue.for.msu.edu/software
Repository: CRAN
Packaged: 2015-01-26 20:07:01 UTC; andy
Date/Publication: 2015-01-27 08:24:52
NeedsCompilation: yes

● Cran Task View: Bayesian, Spatial, SpatioTemporal
● 0 images, 18 functions, 7 datasets
● Reverse Depends: 0

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'spBayes' ...
** package 'spBayes' successfully unpacked and MD5 sums checked
** libs
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c adaptMetropGibbs.cpp -o adaptMetropGibbs.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c idist.cpp -o idist.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c mkSpCov.cpp -o mkSpCov.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c nonSpGLM_AMCMC.cpp -o nonSpGLM_AMCMC.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c ptsInPoly.cpp -o ptsInPoly.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spDynLM.cpp -o spDynLM.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spGLM.cpp -o spGLM.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spGLM_AMCMC.cpp -o spGLM_AMCMC.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spLM.cpp -o spLM.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spLMPredict.cpp -o spLMPredict.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spLMRecover.cpp -o spLMRecover.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spMPPMvDIC.cpp -o spMPPMvDIC.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spMisalign.cpp -o spMisalign.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spMisalignGLM.cpp -o spMisalignGLM.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spMisalignGLMPredict.cpp -o spMisalignGLMPredict.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spMisalignPredict.cpp -o spMisalignPredict.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spMisalignRecover.cpp -o spMisalignRecover.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spMvGLM.cpp -o spMvGLM.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spMvGLMPredict.cpp -o spMvGLMPredict.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spMvGLM_AMCMC.cpp -o spMvGLM_AMCMC.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spMvLM.cpp -o spMvLM.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spMvLMPredict.cpp -o spMvLMPredict.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spMvLMRecover.cpp -o spMvLMRecover.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spPPDynLM.cpp -o spPPDynLM.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spPPGLM.cpp -o spPPGLM.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spPPGLM_AMCMC.cpp -o spPPGLM_AMCMC.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spPPLM.cpp -o spPPLM.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spPPLMPredict.cpp -o spPPLMPredict.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spPPLMRecover.cpp -o spPPLMRecover.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spPPMvGLM.cpp -o spPPMvGLM.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spPPMvGLMPredict.cpp -o spPPMvGLMPredict.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spPPMvGLM_AMCMC.cpp -o spPPMvGLM_AMCMC.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spPPMvLM.cpp -o spPPMvLM.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spPPMvLMPredict.cpp -o spPPMvLMPredict.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c spPPMvLMRecover.cpp -o spPPMvLMRecover.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c util.cpp -o util.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o spBayes.so adaptMetropGibbs.o idist.o mkSpCov.o nonSpGLM_AMCMC.o ptsInPoly.o spDynLM.o spGLM.o spGLM_AMCMC.o spLM.o spLMPredict.o spLMRecover.o spMPPMvDIC.o spMisalign.o spMisalignGLM.o spMisalignGLMPredict.o spMisalignPredict.o spMisalignRecover.o spMvGLM.o spMvGLMPredict.o spMvGLM_AMCMC.o spMvLM.o spMvLMPredict.o spMvLMRecover.o spPPDynLM.o spPPGLM.o spPPGLM_AMCMC.o spPPLM.o spPPLMPredict.o spPPLMRecover.o spPPMvGLM.o spPPMvGLMPredict.o spPPMvGLM_AMCMC.o spPPMvLM.o spPPMvLMPredict.o spPPMvLMRecover.o util.o -L/home/ddbj/local/lib64/R/lib -lRlapack -L/home/ddbj/local/lib64/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/spBayes/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'spBayes'
    finding HTML links ... done
    BEF.dat                                 html  
    FBC07.dat                               html  
    FORMGMT.dat                             html  
    NETemp.dat                              html  
    NYOzone.dat                             html  
    WEF.dat                                 html  
    Zurich.dat                              html  
    adaptMetropGibbs                        html  
    bayesGeostatExact                       html  
    bayesLMConjugate                        html  
    bayesLMRef                              html  
    iDist                                   html  
    mkMvX                                   html  
    mkSpCov                                 html  
    pointsInPoly                            html  
    spDiag                                  html  
    spDynLM                                 html  
    spGLM                                   html  
    spLM                                    html  
    spMisalignGLM                           html  
    spMisalignLM                            html  
    spMvGLM                                 html  
    spMvLM                                  html  
    spPredict                               html  
    spRecover                               html  
** building package indices
** testing if installed package can be loaded
* DONE (spBayes)
Making 'packages.html' ... done