spdep

Package: spdep
Version: 0.6-5
Date: 2016-05-31
Title: Spatial Dependence: Weighting Schemes, Statistics and Models
Encoding: UTF-8
Authors@R: c(person("Roger", "Bivand", role = c("cre", "aut"), email = "Roger.Bivand@nhh.no"), person("Micah", "Altman", role = "ctb"),
person("Luc", "Anselin", role = "ctb"),
person("Renato", "Assunção", role = "ctb"),
person("Olaf", "Berke", role = "ctb"),
person("Andrew", "Bernat", role = "ctb"),
person("Guillaume", "Blanchet", role = "ctb"),
person("Eric", "Blankmeyer", role = "ctb"),
person("Marilia", "Carvalho", role = "ctb"),
person("Bjarke", "Christensen", role = "ctb"),
person("Yongwan", "Chun", role = "ctb"),
person("Carsten", "Dormann", role = "ctb"),
person("Stéphane", "Dray", role = "ctb"),
person("Virgilio", "Gómez-Rubio", role = "ctb"),
person("Martin", "Gubri", role = "ctb"),
person("Rein", "Halbersma", role = "ctb"),
person("Elias", "Krainski", role = "ctb"),
person("Pierre", "Legendre", role = "ctb"),
person("Nicholas", "Lewin-Koh", role = "ctb"),
person("Hongfei", "Li", role = "ctb"),
person("Jielai", "Ma", role = "ctb"),
person("Giovanni", "Millo", role = "ctb"),
person("Werner", "Mueller", role = "ctb"),
person("Hisaji", "Ono", role = "ctb"),
person("Pedro", "Peres-Neto", role = "ctb"),
person("Gianfranco", "Piras", role = "ctb"),
person("Markus", "Reder", role = "ctb"),
person("Michael", "Tiefelsdorf", role = "ctb"),
person("Danlin", "Yu", role = "ctb"))
Depends: R (>= 3.0.0), methods, sp (>= 1.0), Matrix (>= 1.0.12)
Imports: LearnBayes, deldir, boot (>= 1.3-1), splines, coda, nlme,
MASS, stats, gmodels, graphics, grDevices, utils
Suggests: parallel, spam (>= 0.13-1), RANN, rgeos, RColorBrewer,
lattice, xtable, maptools (>= 0.5-4), foreign, igraph, knitr
Description: A collection of functions to create spatial weights matrix
objects from polygon contiguities, from point patterns by distance and
tessellations, for summarizing these objects, and for permitting their
use in spatial data analysis, including regional aggregation by minimum
spanning tree; a collection of tests for spatial autocorrelation,
including global Moran's I, APLE, Geary's C, Hubert/Mantel general cross
product statistic, Empirical Bayes estimates and Assunção/Reis Index,
Getis/Ord G and multicoloured join count statistics, local Moran's I
and Getis/Ord G, saddlepoint approximations and exact tests for global
and local Moran's I; and functions for estimating spatial simultaneous
autoregressive (SAR) lag and error models, impact measures for lag
models, weighted and unweighted SAR and CAR spatial regression models,
semi-parametric and Moran eigenvector spatial filtering, GM SAR error
models, and generalized spatial two stage least squares models.
License: GPL (>= 2)
VignetteBuilder: knitr
URL: https://r-forge.r-project.org/projects/spdep/
NeedsCompilation: yes
Packaged: 2016-05-31 16:27:56 UTC; rsb
Author: Roger Bivand [cre, aut],
Micah Altman [ctb],
Luc Anselin [ctb],
Renato Assunção [ctb],
Olaf Berke [ctb],
Andrew Bernat [ctb],
Guillaume Blanchet [ctb],
Eric Blankmeyer [ctb],
Marilia Carvalho [ctb],
Bjarke Christensen [ctb],
Yongwan Chun [ctb],
Carsten Dormann [ctb],
Stéphane Dray [ctb],
Virgilio Gómez-Rubio [ctb],
Martin Gubri [ctb],
Rein Halbersma [ctb],
Elias Krainski [ctb],
Pierre Legendre [ctb],
Nicholas Lewin-Koh [ctb],
Hongfei Li [ctb],
Jielai Ma [ctb],
Giovanni Millo [ctb],
Werner Mueller [ctb],
Hisaji Ono [ctb],
Pedro Peres-Neto [ctb],
Gianfranco Piras [ctb],
Markus Reder [ctb],
Michael Tiefelsdorf [ctb],
Danlin Yu [ctb]
Maintainer: Roger Bivand <Roger.Bivand@nhh.no>
Repository: CRAN
Date/Publication: 2016-06-02 18:33:23

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'spdep' ...
** package 'spdep' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c card.c -o card.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c dfs_ncomp.c -o dfs_ncomp.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c dnn.c -o dnn.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c eminmaxC.c -o eminmaxC.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c gabriel.c -o gabriel.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c gearyw.c -o gearyw.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c gsymtest.c -o gsymtest.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c init.c -o init.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c insiders.c -o insiders.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c jc.c -o jc.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c knn.c -o knn.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c lagw.c -o lagw.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c listw2Matrix.c -o listw2Matrix.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c listw2sn.c -o listw2sn.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c ml_sse.c -o ml_sse.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c mom_calc.c -o mom_calc.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c nbdists.c -o nbdists.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c polypoly.c -o polypoly.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c relative.c -o relative.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c skater.c -o skater.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c symtest.c -o symtest.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o spdep.so card.o dfs_ncomp.o dnn.o eminmaxC.o gabriel.o gearyw.o gsymtest.o init.o insiders.o jc.o knn.o lagw.o listw2Matrix.o listw2sn.o ml_sse.o mom_calc.o nbdists.o polypoly.o relative.o skater.o symtest.o -L/home/ddbj/local/lib64/R/lib -lRlapack -L/home/ddbj/local/lib64/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/spdep/libs
** R
** data
** inst
** preparing package for lazy loading
in method for 'coerce' with signature '"listw","CsparseMatrix"': no definition for class "listw"
in method for 'coerce' with signature '"listw","RsparseMatrix"': no definition for class "listw"
in method for 'coerce' with signature '"listw","symmetricMatrix"': no definition for class "listw"
** help
*** installing help indices
  converting help for package 'spdep'
    finding HTML links ... done
    COL.OLD                                 html  
    EBImoran.mc                             html  
    EBest                                   html  
    EBlocal                                 html  
    GMerrorsar                              html  
    LR.sarlm                                html  
    MCMCsamp                                html  
    ME                                      html  
    NY_data                                 html  
    SpatialFiltering                        html  
    afcon                                   html  
    aggregate.nb                            html  
    airdist                                 html  
    anova.sarlm                             html  
    aple                                    html  
    aple.mc                                 html  
    aple.plot                               html  
    as_dgRMatrix_listw                      html  
    auckland                                html  
    autocov_dist                            html  
    baltimore                               html  
    bhicv                                   html  
    boston                                  html  
    bptest.sarlm                            html  
    card                                    html  
    cell2nb                                 html  
    choynowski                              html  
    columbus                                html  
    compon                                  html  
    diffnb                                  html  
    dnearneigh                              html  
    do_ldet                                 html  
    droplinks                               html  
    edit.nb                                 html  
    eigenw                                  html  
    eire                                    html  
    elect80                                 html  
    errorsarlm                              html  
    geary                                   html  
    geary.mc                                html  
    geary.test                              html  
    getisord                                html  
    globalG.test                            html  
    graphneigh                              html  
Rd warning: /tmp/RtmpBo7S8A/R.INSTALL4ddf78f309e7/spdep/man/graphneigh.Rd:32: missing file link 'gBuffer'
    gstsls                                  html  
    hopkins                                 html  
    house                                   html  
    huddersfield                            html  
    impacts.sarlm                           html  
    include.self                            html  
    invIrM                                  html  
    joincount.mc                            html  
    joincount.multi                         html  
    joincount.test                          html  
    knearneigh                              html  
    knn2nb                                  html  
    lag.listw                               html  
    lagmess                                 html  
    lagsarlm                                html  
    lee                                     html  
    lee.mc                                  html  
    lee.test                                html  
    lextrB                                  html  
    listw2sn                                html  
    lm.LMtests                              html  
    lm.morantest                            html  
    lm.morantest.exact                      html  
    lm.morantest.sad                        html  
    localG                                  html  
    localmoran                              html  
    localmoran.exact                        html  
    localmoran.sad                          html  
    mat2listw                               html  
    moran                                   html  
    moran.mc                                html  
    moran.plot                              html  
    moran.test                              html  
    mstree                                  html  
    nb2INLA                                 html  
    nb2WB                                   html  
    nb2blocknb                              html  
    nb2lines                                html  
    nb2listw                                html  
    nb2mat                                  html  
    nbcosts                                 html  
    nbdists                                 html  
    nblag                                   html  
    nboperations                            html  
    nc.sids                                 html  
    p.adjustSP                              html  
    plot.mst                                html  
    plot.nb                                 html  
    plot.skater                             html  
    poly2nb                                 html  
    predict.sarlm                           html  
    probmap                                 html  
    prunecost                               html  
    prunemst                                html  
    read.gal                                html  
    read.gwt2nb                             html  
    residuals.sarlm                         html  
    rotation                                html  
    sacsarlm                                html  
    set.mcOption                            html  
    set.spChkOption                         html  
    similar.listw                           html  
    skater                                  html  
    sp.correlogram                          html  
    sp.mantel.mc                            html  
    spautolm                                html  
    spdep                                   html  
    spweights.constants                     html  
    ssw                                     html  
    stsls                                   html  
    subset.listw                            html  
    subset.nb                               html  
    summary.nb                              html  
    summary.sarlm                           html  
    testnb                                  html  
    tolerance.nb                            html  
Rd warning: /tmp/RtmpBo7S8A/R.INSTALL4ddf78f309e7/spdep/man/tolerance.nb.Rd:34: missing file link 'graph2nb'
    trW                                     html  
    tri2nb                                  html  
    used.cars                               html  
    wheat                                   html  
    write.nb.gal                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (spdep)
Making 'packages.html' ... done