Last data update: 2014.03.03
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ssviz
Package: ssviz
Type: Package
Title: A small RNA-seq visualizer and analysis toolkit
Version: 1.6.2
Date: 2014-07-15
Author: Diana Low
Maintainer: Diana Low <lowdiana@gmail.com>
Description: Small RNA sequencing viewer
License: GPL-2
Depends: R (>=
2.15.1), methods, Rsamtools, Biostrings, reshape, ggplot2, RColorBrewer
biocViews: Sequencing,RNASeq,Visualization,MultipleComparison,Genetics
Collate: AllClasses.R AllGenerics.R helper.R
VignetteBuilder: knitr
Suggests: knitr
NeedsCompilation: no
Packaged: 2016-05-16 04:36:39 UTC; biocbuild
Install log
* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'ssviz' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'ssviz'
finding HTML links ... done
counts html
ctrlbam html
getCountMatrix-methods html
getCountMatrix html
logicalORmissing-class html
ntfreq-methods html
ntfreq html
pctrlbam html
pingpong-methods html
pingpong html
plotDistro-methods html
plotDistro html
plotFreq-methods html
plotFreq html
plotPP-methods html
plotPP html
plotRegion-methods html
plotRegion html
ptreatbam html
readBam-methods html
readBam html
ssviz-package html
treatbam html
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (ssviz)
Making 'packages.html' ... done
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