tgp

Package: tgp
Title: Bayesian Treed Gaussian Process Models
Version: 2.4-14
Date: 2016-02-06
Author: Robert B. Gramacy <rbgramacy@chicagobooth.edu> and Matt A. Taddy <taddy@chicagobooth.edu>
Depends: R (>= 2.14.0)
Imports: maptree
Suggests: MASS
Description: Bayesian nonstationary, semiparametric nonlinear regression
and design by treed Gaussian processes (GPs) with jumps to the limiting
linear model (LLM). Special cases also implemented include Bayesian
linear models, CART, treed linear models, stationary separable and
isotropic GPs, and GP single-index models. Provides 1-d and 2-d plotting functions
(with projection and slice capabilities) and tree drawing, designed for
visualization of tgp-class output. Sensitivity analysis and
multi-resolution models are supported. Sequential experimental
design and adaptive sampling functions are also provided, including ALM,
ALC, and expected improvement. The latter supports derivative-free
optimization of noisy black-box functions.
Maintainer: Robert B. Gramacy <rbgramacy@chicagobooth.edu>
License: LGPL
URL: http://bobby.gramacy.com/r_packages/tgp
NeedsCompilation: yes
Packaged: 2016-02-06 16:06:06 UTC; bobby
Repository: CRAN
Date/Publication: 2016-02-07 10:50:12

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'tgp' ...
** package 'tgp' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c all_draws.c -o all_draws.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c base.cc -o base.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c corr.cc -o corr.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c dopt.c -o dopt.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c exp.cc -o exp.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c exp_sep.cc -o exp_sep.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c gen_covar.c -o gen_covar.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c gp.cc -o gp.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c lh.c -o lh.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c lik_post.c -o lik_post.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c linalg.c -o linalg.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c list.cc -o list.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c matern.cc -o matern.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c matrix.c -o matrix.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c model.cc -o model.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c mr_exp_sep.cc -o mr_exp_sep.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c mstructs.cc -o mstructs.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c params.cc -o params.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c predict.c -o predict.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c predict_linear.c -o predict_linear.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c rand_draws.c -o rand_draws.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c rand_pdf.c -o rand_pdf.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c randomkit.c -o randomkit.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c rhelp.c -o rhelp.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c sim.cc -o sim.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c temper.cc -o temper.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c tgp.cc -o tgp.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -DRPRINT -DNDEBUG  -fpic  -g -O2  -c tree.cc -o tree.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o tgp.so all_draws.o base.o corr.o dopt.o exp.o exp_sep.o gen_covar.o gp.o lh.o lik_post.o linalg.o list.o matern.o matrix.o model.o mr_exp_sep.o mstructs.o params.o predict.o predict_linear.o rand_draws.o rand_pdf.o randomkit.o rhelp.o sim.o temper.o tgp.o tree.o -L/home/ddbj/local/lib64/R/lib -lRlapack -L/home/ddbj/local/lib64/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/tgp/libs
** R
** data
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'tgp'
    finding HTML links ... done
    btgp                                    html  
    default.itemps                          html  
    dopt.gp                                 html  
    exp2d                                   html  
    exp2d.Z                                 html  
    exp2d.rand                              html  
    friedman.1.data                         html  
    interp.loess                            html  
    itemps                                  html  
    lhs                                     html  
    mapT                                    html  
    optim.tgp                               html  
    partition                               html  
    plot.tgp                                html  
    predict.tgp                             html  
    sens                                    html  
    tgp-internal                            html  
    tgp-package                             html  
    tgp.default.params                      html  
    tgp.design                              html  
    tgp.trees                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (tgp)
Making 'packages.html' ... done