umx

Package: umx
Version: 1.2.7
Date: 2016-05-01
Title: Structural Equation Modelling in R with 'OpenMx'
Authors@R: c(person("Timothy C", "Bates", role = c("aut", "cre"),
email = "timothy.c.bates@gmail.com"))
Maintainer: Timothy C Bates <timothy.c.bates@gmail.com>
License: GPL-3
URL: http://github.com/tbates/umx
Description: Create, run, and report structural equation and twin models quickly.
If you're just starting out, try typing '?umx'.
Depends: R (>= 3.2.0), OpenMx (>= 2.5.0)
Imports: DiagrammeR, knitr, MASS, Matrix, methods, mvtnorm, numDeriv,
polycor, R2HTML, RCurl, utils
Suggests: devtools, testthat, gdata
BugReports: http://github.com/tbates/umx/issues
LazyData: true
RoxygenNote: 5.0.1
NeedsCompilation: no
Packaged: 2016-05-06 13:09:12 UTC; tim
Author: Timothy C Bates [aut, cre]
Repository: CRAN
Date/Publication: 2016-05-06 23:00:50

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'umx' ...
** package 'umx' successfully unpacked and MD5 sums checked
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'umx'
    finding HTML links ... done
    RMSEA.MxModel                           html  
    finding level-2 HTML links ... done

    RMSEA                                   html  
    RMSEA.summary.mxmodel                   html  
    confint.MxModel                         html  
    dl_from_dropbox                         html  
    ex9_6                                   html  
    extractAIC.MxModel                      html  
    getOpenMx                               html  
    loadings.MxModel                        html  
    loadings                                html  
    logLik                                  html  
    plot.MxModel                            html  
    qm                                      html  
    reliability                             html  
    residuals.MxModel                       html  
    umx-deprecated                          html  
    umx                                     html  
    umxACE                                  html  
    umxACESexLim                            html  
    umxACEcov                               html  
    umxAPA                                  html  
    umxAdd1                                 html  
    umxCF_SexLim                            html  
    umxCI                                   html  
    umxCI_boot                              html  
    umxCP                                   html  
    umxCompare                              html  
    umxCov2cor                              html  
    umxCovData                              html  
    umxDiagnose                             html  
    umxDrop1                                html  
    umxEFA                                  html  
    umxEquate                               html  
    umxEval                                 html  
    umxExpCov                               html  
    umxExpMeans                             html  
    umxFactor                               html  
    umxFitIndices                           html  
    umxFixAll                               html  
    umxGetParameters                        html  
    umxGxE                                  html  
    umxGxE_window                           html  
    umxHetCor                               html  
    umxIP                                   html  
    umxJiggle                               html  
    umxLabel                                html  
    umxLatent                               html  
    umxMI                                   html  
    umxModify                               html  
    umxPadAndPruneForDefVars                html  
    umxPath                                 html  
    umxPlotACE                              html  
    umxPlotACEcov                           html  
    umxPlotCP                               html  
    umxPlotGxE                              html  
    umxPlotIP                               html  
    umxRAM                                  html  
    umxReduce                               html  
    umxRun                                  html  
    umxSetParameters                        html  
    umxSummary.MxModel                      html  
    umxSummary                              html  
    umxSummaryACE                           html  
    umxSummaryACEcov                        html  
    umxSummaryCP                            html  
    umxSummaryGxE                           html  
    umxSummaryIP                            html  
    umxThresholdMatrix                      html  
    umxTwoStage                             html  
    umxUnexplainedCausalNexus               html  
    umxValues                               html  
    umx_APA_model_CI                        html  
    umx_APA_pval                            html  
    umx_RAM_ordinal_objective               html  
    umx_add_variances                       html  
    umx_aggregate                           html  
    umx_apply                               html  
    umx_as_numeric                          html  
    umx_check                               html  
    umx_check_OS                            html  
    umx_check_model                         html  
    umx_check_names                         html  
    umx_check_parallel                      html  
    umx_cont_2_quantiles                    html  
    umx_cor                                 html  
    umx_cov2raw                             html  
    umx_cov_diag                            html  
    umx_default_option                      html  
    umx_drop_ok                             html  
    umx_explode                             html  
    umx_find_object                         html  
    umx_fix_first_loadings                  html  
    umx_fix_latents                         html  
    umx_fun_mean_sd                         html  
    umx_get_bracket_addresses               html  
    umx_get_checkpoint                      html  
    umx_get_cores                           html  
    umx_get_optimizer                       html  
    umx_grep                                html  
    umx_has_CIs                             html  
    umx_has_been_run                        html  
    umx_has_means                           html  
    umx_has_square_brackets                 html  
    umx_is_MxMatrix                         html  
    umx_is_MxModel                          html  
    umx_is_RAM                              html  
    umx_is_cov                              html  
    umx_is_endogenous                       html  
    umx_is_exogenous                        html  
    umx_is_ordered                          html  
    umx_lower2full                          html  
    umx_make                                html  
    umx_make_MR_data                        html  
    umx_make_TwinData                       html  
    umx_make_bin_cont_pair_data             html  
    umx_make_fake_data                      html  
    umx_means                               html  
    umx_merge_CIs                           html  
    umx_move_file                           html  
    umx_msg                                 html  
    umx_names                               html  
    umx_object_as_str                       html  
    umx_open                                html  
    umx_paste_names                         html  
    umx_pb_note                             html  
    umx_print                               html  
    umx_read_lower                          html  
    umx_rename                              html  
    umx_rename_file                         html  
    umx_reorder                             html  
    umx_residualize                         html  
    umx_rot                                 html  
    umx_round                               html  
    umx_scale                               html  
    umx_scale_wide_twin_data                html  
    umx_set_auto_plot                       html  
    umx_set_auto_run                        html  
    umx_set_checkpoint                      html  
    umx_set_condensed_slots                 html  
    umx_set_cores                           html  
    umx_set_optimizer                       html  
    umx_set_plot_format                     html  
    umx_set_table_format                    html  
    umx_show                                html  
    umx_sql_from_excel                      html  
    umx_standardize_ACE                     html  
    umx_standardize_ACEcov                  html  
    umx_standardize_CP                      html  
    umx_standardize_IP                      html  
    umx_standardize_RAM                     html  
    umx_string_to_algebra                   html  
    umx_swap_a_block                        html  
    umx_time                                html  
    umx_trim                                html  
    us_skinfold_data                        html  
    xmuHasSquareBrackets                    html  
    xmuLabel_MATRIX_Model                   html  
    xmuLabel_Matrix                         html  
    xmuLabel_RAM_Model                      html  
    xmuMI                                   html  
    xmuMakeDeviationThresholdsMatrices      html  
    xmuMakeOneHeadedPathsFromPathList       html  
    xmuMakeThresholdsMatrices               html  
    xmuMakeTwoHeadedPathsFromPathList       html  
    xmuMaxLevels                            html  
    xmuMinLevels                            html  
    xmuPropagateLabels                      html  
    xmu_dot_make_paths                      html  
    xmu_dot_make_residuals                  html  
    xmu_start_value_list                    html  
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (umx)
Making 'packages.html' ... done