xgboost

Package: xgboost
Type: Package
Title: Extreme Gradient Boosting
Version: 0.4-3
Date: 2015-08-01
Author: Tianqi Chen <tianqi.tchen@gmail.com>, Tong He <hetong007@gmail.com>, Michael Benesty <michael@benesty.fr>
Maintainer: Tong He <hetong007@gmail.com>
Description: Extreme Gradient Boosting, which is an
efficient implementation of gradient boosting framework.
This package is its R interface. The package includes efficient
linear model solver and tree learning algorithms. The package can automatically
do parallel computation on a single machine which could be more than 10 times faster
than existing gradient boosting packages. It supports various
objective functions, including regression, classification and ranking. The
package is made to be extensible, so that users are also allowed to define
their own objectives easily.
License: Apache License (== 2.0) | file LICENSE
URL: https://github.com/dmlc/xgboost
BugReports: https://github.com/dmlc/xgboost/issues
VignetteBuilder: knitr
Suggests: knitr, ggplot2 (>= 1.0.0), DiagrammeR (>= 0.6), Ckmeans.1d.dp
(>= 3.3.1), vcd (>= 1.3)
Depends: R (>= 2.10)
Imports: Matrix (>= 1.1-0), methods, data.table (>= 1.9.4), magrittr
(>= 1.5), stringr (>= 0.6.2)
NeedsCompilation: yes
Packaged: 2016-02-15 12:18:25 UTC; hetong007
Repository: CRAN
Date/Publication: 2016-02-15 14:41:12

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'xgboost' ...
** package 'xgboost' successfully unpacked and MD5 sums checked
** libs
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -DXGBOOST_CUSTOMIZE_MSG_ -DXGBOOST_CUSTOMIZE_PRNG_ -DXGBOOST_STRICT_CXX98_ -DRABIT_CUSTOMIZE_MSG_ -DRABIT_STRICT_CXX98_ -I. -I/usr/local/include   -fopenmp  -fpic  -g -O2  -c xgboost_R.cpp -o xgboost_R.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -DXGBOOST_CUSTOMIZE_MSG_ -DXGBOOST_CUSTOMIZE_PRNG_ -DXGBOOST_STRICT_CXX98_ -DRABIT_CUSTOMIZE_MSG_ -DRABIT_STRICT_CXX98_ -I. -I/usr/local/include    -fpic  -g -O2  -c xgboost_assert.c -o xgboost_assert.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -DXGBOOST_CUSTOMIZE_MSG_ -DXGBOOST_CUSTOMIZE_PRNG_ -DXGBOOST_STRICT_CXX98_ -DRABIT_CUSTOMIZE_MSG_ -DRABIT_STRICT_CXX98_ -I. -I/usr/local/include   -fopenmp  -fpic  -g -O2  -c wrapper/xgboost_wrapper.cpp -o wrapper/xgboost_wrapper.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -DXGBOOST_CUSTOMIZE_MSG_ -DXGBOOST_CUSTOMIZE_PRNG_ -DXGBOOST_STRICT_CXX98_ -DRABIT_CUSTOMIZE_MSG_ -DRABIT_STRICT_CXX98_ -I. -I/usr/local/include   -fopenmp  -fpic  -g -O2  -c src/io/io.cpp -o src/io/io.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -DXGBOOST_CUSTOMIZE_MSG_ -DXGBOOST_CUSTOMIZE_PRNG_ -DXGBOOST_STRICT_CXX98_ -DRABIT_CUSTOMIZE_MSG_ -DRABIT_STRICT_CXX98_ -I. -I/usr/local/include   -fopenmp  -fpic  -g -O2  -c src/gbm/gbm.cpp -o src/gbm/gbm.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -DXGBOOST_CUSTOMIZE_MSG_ -DXGBOOST_CUSTOMIZE_PRNG_ -DXGBOOST_STRICT_CXX98_ -DRABIT_CUSTOMIZE_MSG_ -DRABIT_STRICT_CXX98_ -I. -I/usr/local/include   -fopenmp  -fpic  -g -O2  -c src/tree/updater.cpp -o src/tree/updater.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -DXGBOOST_CUSTOMIZE_MSG_ -DXGBOOST_CUSTOMIZE_PRNG_ -DXGBOOST_STRICT_CXX98_ -DRABIT_CUSTOMIZE_MSG_ -DRABIT_STRICT_CXX98_ -I. -I/usr/local/include   -fopenmp  -fpic  -g -O2  -c subtree/rabit/src/engine_empty.cc -o subtree/rabit/src/engine_empty.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -DXGBOOST_CUSTOMIZE_MSG_ -DXGBOOST_CUSTOMIZE_PRNG_ -DXGBOOST_STRICT_CXX98_ -DRABIT_CUSTOMIZE_MSG_ -DRABIT_STRICT_CXX98_ -I. -I/usr/local/include   -fopenmp  -fpic  -g -O2  -c src/io/dmlc_simple.cpp -o src/io/dmlc_simple.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o xgboost.so xgboost_R.o xgboost_assert.o ./wrapper/xgboost_wrapper.o ./src/io/io.o ./src/gbm/gbm.o ./src/tree/updater.o ./subtree/rabit/src/engine_empty.o ./src/io/dmlc_simple.o -fopenmp -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/xgboost/libs
** R
** data
** demo
** inst
** preparing package for lazy loading
Creating a generic function from function 'getinfo' in package 'xgboost'
Creating a generic function for 'predict' from package 'stats' in package 'xgboost'
Creating a generic function from function 'setinfo' in package 'xgboost'
Creating a generic function from function 'slice' in package 'xgboost'
** help
*** installing help indices
  converting help for package 'xgboost'
    finding HTML links ... done
    agaricus.test                           html  
    agaricus.train                          html  
    getinfo                                 html  
    nrow-xgb.DMatrix-method                 html  
    predict-xgb.Booster-method              html  
    predict-xgb.Booster.handle-method       html  
    setinfo                                 html  
    slice                                   html  
    xgb.DMatrix                             html  
    xgb.DMatrix.save                        html  
    xgb.cv                                  html  
    xgb.dump                                html  
    xgb.importance                          html  
    xgb.load                                html  
    xgb.model.dt.tree                       html  
    xgb.plot.importance                     html  
    xgb.plot.tree                           html  
    xgb.save                                html  
    xgb.save.raw                            html  
    xgb.train                               html  
    xgboost                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (xgboost)
Making 'packages.html' ... done