Last data update: 2014.03.03

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CranContrib
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Results 1 - 3 of 3 found.
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CONFESS : Cell OrderiNg by FluorEScence Signal

Package: CONFESS
Type: Package
Title: Cell OrderiNg by FluorEScence Signal
Version: 1.0.2
Date: 2016-04-28
Author: Diana LOW and Efthimios MOTAKIS
Maintainer: Diana LOW <dlow@imcb.a-star.edu.sg>
Description: Single Cell Fluidigm Spot Detector.
License: GPL-2
LazyData: TRUE
Depends: R (>= 3.3), grDevices, utils, stats, graphics
Imports:
methods,changepoint,cluster,contrast,ecp,EBImage,flexmix,flowCore,flowClust,flowMeans,flowMerge,flowPeaks,foreach,ggplot2,grid,limma,MASS,moments,outliers,parallel,plotrix,raster,readbitmap,reshape2,SamSPECTRAL,waveslim,wavethresh,zoo
biocViews:
GeneExpression,DataImport,CellBiology,Clustering,RNASeq,QualityControl,Visualization,TimeCourse,Regression,Classification
Collate: fluo_est.R fluo_NBE.R internal_fluo_NBE.R internal_fluo_est.R
internal_DDHF.R simulator.R cases.R
RoxygenNote: 5.0.1
VignetteBuilder: knitr
Suggests: BiocStyle, knitr, rmarkdown, CONFESSdata
NeedsCompilation: no
Packaged: 2016-05-16 06:08:47 UTC; biocbuild

● Data Source: BioConductor
● 0 images, 110 functions, 12 datasets
● Reverse Depends: 0

flowMerge : Cluster Merging for Flow Cytometry Data

Package: flowMerge
Type: Package
Title: Cluster Merging for Flow Cytometry Data
Version: 2.20.0
Date: 2011-05-26
Author: Greg Finak <gfinak@fhcrc.org>, Raphael Gottardo
<rgottard@fhcrc.org>
Maintainer: Greg Finak <gfinak@fhcrc.org>
Description: Merging of mixture components for model-based automated
gating of flow cytometry data using the flowClust framework.
Note: users should have a working copy of flowClust 2.0
installed.
License: Artistic-2.0
LazyLoad: yes
Collate: SetClasses.R SetMethods.R flowMerge.R
Depends: graph, feature, flowClust, Rgraphviz, foreach, snow
Enhances: doMC, multicore
Imports: rrcov, flowCore, graphics, methods, stats, utils
biocViews: Clustering, FlowCytometry
NeedsCompilation: no
Packaged: 2016-05-04 03:14:58 UTC; biocbuild

● Data Source: BioConductor
● BiocViews: Clustering, FlowCytometry
● 0 images, 25 functions, 1 datasets
Reverse Depends: 1

flowTrans : Parameter Optimization for Flow Cytometry Data Transformation

Package: flowTrans
Type: Package
Title: Parameter Optimization for Flow Cytometry Data Transformation
Version: 1.24.0
Date: 2010-04-21
Author: Greg Finak <gfinak@fredhutch.org>, Juan Manuel-Perez
<jperez@ircm.qc.ca>, Raphael Gottardo
<rgottard@fredhutch.org>
Maintainer: Greg Finak <gfinak@fredhutch.org>
Description: Profile maximum likelihood estimation of parameters for
flow cytometry data transformations.
License: Artistic-2.0
LazyLoad: yes
Depends: R (>= 2.11.0), flowCore, flowViz, flowClust
Imports: flowCore, methods, flowViz, stats, flowClust
Collate: mclMultivArcSinh.R mclMultivBiexp.R mclMultivLinLog.R
mclMultivBoxCox.R arcsinhTransformWrapper.R
biexponentialTransformWrapper.R boxcoxTransform.R flowTrans.R
linLog.R setMethods.R
biocViews: FlowCytometry
NeedsCompilation: no
Packaged: 2016-05-04 03:37:13 UTC; biocbuild

● Data Source: BioConductor
● BiocViews: FlowCytometry
2 images, 7 functions, 0 datasets
● Reverse Depends: 0