Package: mmm
Type: Package
Title: an R package for analyzing multivariate longitudinal data with
multivariate marginal models
Version: 1.4
Date: 2014-01-01
Author: Ozgur Asar, Ozlem Ilk
Depends: gee
Maintainer: Ozgur Asar <o.asar@lancaster.ac.uk>
Description: fits multivariate marginal models for multivariate longitudinal data for both continuous and discrete responses
License: GPL (>= 2)
Packaged: 2014-01-01 02:48:29 UTC; asar
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-01-01 05:19:53
Package: DTComPair
Type: Package
Title: Comparison of Binary Diagnostic Tests in a Paired Study Design
Version: 1.0.3
Date: 2014-02-15
Author: Christian Stock, Thomas Hielscher
Maintainer: Christian Stock <stock@imbi.uni-heidelberg.de>
Depends: gee, PropCIs
Description: This package contains functions to compare the accuracy of two binary diagnostic tests in a "paired" study design, i.e. when each test is applied to each subject in the study.
License: GPL
Packaged: 2014-02-15 21:38:13 UTC; christianstock
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-02-16 00:43:17
Package: diffdepprop
Type: Package
Title: Calculates Confidence Intervals for two Dependent Proportions
Version: 0.1-9
Date: 2013-05-03
Author: Daniela Wenzel, Antonia Zapf
Maintainer: Daniela Wenzel <dani-wenzel@gmx.net>
Description: The package includes functions to calculate confidence
intervals for the difference of dependent proportions. There
are two functions implemented to edit the data (dichotomising
with the help of cutpoints, counting accordance and discordance
of two tests or situations). For the calculation of the
confidence intervals entries of the fourfold table are needed.
Depends: gee, rootSolve, PropCIs
License: GPL
Packaged: 2013-05-03 12:18:05 UTC; schererr
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2013-05-03 19:07:38
Package: aSPU
Version: 1.42
Date: 2016-5-2
Title: Adaptive Sum of Powered Score Test
Description: R codes for the (adaptive) Sum of Powered Score ('SPU' and 'aSPU')
tests, inverse variance weighted Sum of Powered score ('SPUw' and 'aSPUw') tests
and gene-based and some pathway based association tests (Pathway based Sum of
Powered Score tests ('SPUpath'), adaptive 'SPUpath' ('aSPUpath') test, 'GEEaSPU'
test for multiple traits - single 'SNP' (single-nucleotide-polymorphism)
association in generalized estimation equations, 'MTaSPUs' test for multiple
traits - single 'SNP' association with Genome Wide Association Studies ('GWAS')
summary statistics, Gene-based Association Test that uses an extended Simes
procedure ('GATES'), Hybrid Set-based Test ('HYST') and extended version
of 'GATES' test for pathway-based association testing ('GATES-Simes'). ).
The tests can be used with genetic and other data sets with covariates. The
response variable is binary or quantitative. Summary; (1) Single trait-'SNP' set
association with individual-level data ('aSPU', 'aSPUw'), (2) Single trait-'SNP'
set association with summary statistics ('aSPUs'), (3) Single trait-pathway
association with individual-level data ('aSPUpath'), (4) Single trait-pathway
association with summary statistics ('aSPUsPath'), (5) Multiple traits-single
'SNP' association with individual-level data ('GEEaSPU'), (6) Multiple traits-
single SNP association with summary statistics ('MTaSPUs'), (7) Multiple traits-`SNP' set association with summary statistics(`MTaSPUsSet'), (8) Multiple traits-pathway association with summary statistics(`MTaSPUsSetPath').
Author: Il-Youp Kwak and others (See Author(s) in each function manual)
Maintainer: Il-Youp Kwak <ikwak@umn.edu>
Suggests: knitr
VignetteBuilder: knitr
Imports: Rcpp (>= 0.12.1)
Depends: R (>= 3.1.0), gee, MASS, mvtnorm, fields, matrixStats
License: GPL-3
LinkingTo: Rcpp, RcppArmadillo
URL: https://github.com/ikwak2/aSPU
RoxygenNote: 5.0.1
NeedsCompilation: yes
Packaged: 2016-05-02 17:30:10 UTC; ikwak
Repository: CRAN
Date/Publication: 2016-05-03 02:08:52
Package: saws
Type: Package
Title: Small-Sample Adjustments for Wald tests Using Sandwich
Estimators
Version: 0.9-6.1
Date: 2013-12-11
Author: Michael P. Fay
Maintainer: Michael P. Fay <mfay@niaid.nih.gov>
Description: Tests coefficients with sandwich estimator of variance and with small samples. Regression types supported are gee, linear regression, and conditional logistic regression.
Depends: R (>= 2.6.0), gee, stats
Suggests: MASS
License: GPL (>= 2)
Packaged: 2014-01-22 22:09:42 UTC; faym
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-01-23 00:15:29