Last data update: 2014.03.03

Data Source

R Release (3.2.3)
CranContrib
BioConductor
All

Data Type

Packages
Functions
Images
Data set

Classification

Results 1 - 10 of 39 found.
[1] < 1 2 3 4 > [4]  Sort:

gamlss.spatial : Spatial Terms in GAMLSS Models

Package: gamlss.spatial
Type: Package
Title: Spatial Terms in GAMLSS Models
Version: 1.3.1
Date: 2015-11-13
Authors@R: c(person("Fernanda", "De Bastiani", role = c("aut", "cre", "cph"), email = "fernandadebastiani@gmail.com"),
person("Mikis", "Stasinopoulos", role = c("aut"),
email = "d.stasinopoulos@londonmet.ac.uk"),
person("Bob", "Rigby", role = c("aut"),
email = "r.rigby@londonmet.ac.uk" )
)
Description: It allows us to fit Gaussian Markov Random Field (GMRF) within the GAMLSS algorithms.
License: GPL-2 | GPL-3
URL: http://www.gamlss.org/
Depends: R (>= 2.15.0), gamlss.dist, gamlss (>= 4.2-7), spam, mgcv
Imports: stats, grDevices, graphics, methods
Suggests: spdep, maptools
Repository: CRAN
NeedsCompilation: no
Packaged: 2016-06-18 19:52:11 UTC; Usuario
Author: Fernanda De Bastiani [aut, cre, cph],
Mikis Stasinopoulos [aut],
Bob Rigby [aut]
Maintainer: Fernanda De Bastiani <fernandadebastiani@gmail.com>
Date/Publication: 2016-06-19 16:47:11

● Data Source: CranContrib
● 0 images, 4 functions, 0 datasets
● Reverse Depends: 0

gamm4 : Generalized additive mixed models using mgcv and lme4

Package: gamm4
Version: 0.2-3
Author: Simon Wood, Fabian Scheipl
Maintainer: Simon Wood <simon.wood@r-project.org>
Title: Generalized additive mixed models using mgcv and lme4
Description: Fit generalized additive mixed models via a version of
mgcv's gamm function, using lme4 for estimation.
Depends: R (>= 2.9.0), methods, Matrix, lme4 (>= 0.999375-31), mgcv (>=
1.7-23)
License: GPL (>= 2)
Packaged: 2014-07-20 21:33:01 UTC; sw283
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-07-21 12:24:35

● Data Source: CranContrib
● 0 images, 1 functions, 0 datasets
Reverse Depends: 1

gammSlice : Generalized additive mixed model analysis via slice sampling

Package: gammSlice
Type: Package
Title: Generalized additive mixed model analysis via slice sampling
Version: 1.3
Date: 2015-01-21
Author: Tung Pham and Matt Wand
Maintainer: Tung Pham <pham.t@unimelb.edu.au>
Description: Uses a slice sampling-based Markov chain Monte Carlo to
conduct Bayesian fitting and inference for generalized additive
mixed models (GAMM). Generalized linear mixed models and
generalized additive models are also handled as special cases
of GAMM.
Depends: R (>= 2.13), KernSmooth, lattice, mgcv
License: GPL (>= 2)
Packaged: 2015-01-21 06:46:35 UTC; tungp
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2015-01-21 08:24:52

● Data Source: CranContrib
● 0 images, 8 functions, 0 datasets
● Reverse Depends: 0

logistf : Firth's bias reduced logistic regression

Package: logistf
Type: Package
Title: Firth's bias reduced logistic regression
Version: 1.21
Date: 2013-06-26
Author: Georg Heinze <georg.heinze@meduniwien.ac.at>, Meinhard Ploner,
Daniela Dunkler (former versions), Harry Southworth (former
versions)
Maintainer: Georg Heinze <georg.heinze@meduniwien.ac.at>
Depends: R (>= 3.0.0), mice, mgcv
Description: Firth's bias reduced logistic regression approach with
penalized profile likelihood based confidence intervals for
parameter estimates.
License: GPL
URL:
http://cemsiis.meduniwien.ac.at/en/kb/science-research/software/statistical-software/fllogistf/
LazyLoad: yes
Packaged: 2013-06-26 11:46:55 UTC; Georg
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2013-06-26 18:31:49

● Data Source: CranContrib
● 0 images, 20 functions, 0 datasets
Reverse Depends: 1

modTempEff : Modelling temperature effects using time series data

Package: modTempEff
Type: Package
Title: Modelling temperature effects using time series data
Version: 1.5.2
Date: 2014-09-16
Author: Vito M.R. Muggeo
Maintainer: Vito M.R. Muggeo <vito.muggeo@unipa.it>
Description: Fits a Constrained Segmented Distributed Lag regression model
to epidemiological time series of mortality, temperature, and other confounders.
Depends: mgcv, splines
License: GPL
Packaged: 2014-09-18 09:39:13 UTC; user
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-09-18 12:57:05

● Data Source: CranContrib
● 0 images, 12 functions, 1 datasets
● Reverse Depends: 0

mombf : Moment and Inverse Moment Bayes Factors

Package: mombf
Version: 1.7.1
Date: 2016-05-17
Title: Moment and Inverse Moment Bayes Factors
Author: David Rossell, John D. Cook, Donatello Telesca, P. Roebuck
Maintainer: David Rossell <rosselldavid@gmail.com>
Depends: R (>= 2.14.0), methods, mvtnorm, ncvreg, actuar, mgcv
Imports: survival
Suggests: parallel
Description: Model selection and parameter estimation based on non-local priors. Routines are provided to compute Bayes factors, marginal densities and to perform variable selection in regression setups. Routines to evaluate prior densities, distribution functions, quantiles and modes are included.
License: GPL (>= 2)
URL: http://mombf.r-forge.r-project.org/
LazyLoad: yes
Collate: AllClasses.R AllGenerics.R bms_ortho.R derivatives_nlps.R
msPriorSpec.R imombf.R mode2g.R pimom.R imomknown.R
modelSelection.R pmom.R dimom.R imomunknown.R priorp2g.R
margpimom.R margskewnorm.R mombf.lm.R qimom.R emom.R dmom.R
mombf.R qmom.R g2mode.R margpmom.R margpemom.R momknown.R
imombf.lm.R momunknown.R pmomLM.R pmomPM.R emomLM.R postMode.R
pplProbit.R greedyGLM.R ppmodel.R zellnerLM.R rmom.R cox.R
NeedsCompilation: yes
Packaged: 2016-05-17 19:50:29 UTC; drossell
Repository: CRAN
Date/Publication: 2016-05-18 01:23:34

● Data Source: CranContrib
● Cran Task View: Bayesian
● 0 images, 14 functions, 1 datasets
● Reverse Depends: 0

multipleNCC : Weighted Cox-Regression for Nested Case-Control Data

Package: multipleNCC
Type: Package
Title: Weighted Cox-Regression for Nested Case-Control Data
Version: 1.2-1
Date: 2016-04-16
Author: Nathalie C. Stoer, Sven Ove Samuelsen
Maintainer: Nathalie C. Stoer <nathalcs@math.uio.no>
Description: Fit Cox proportional hazard models with a weighted
partial likelihood. It handles one or multiple endpoints, additional matching
and makes it possible to reuse controls for other endpoints.
Depends: survival, mgcv
License: GPL-2
NeedsCompilation: no
Packaged: 2016-04-19 14:50:45 UTC; Nathalie
Repository: CRAN
Date/Publication: 2016-04-19 17:34:59

● Data Source: CranContrib
● Cran Task View: Survival
● 0 images, 16 functions, 0 datasets
● Reverse Depends: 0

nontarget : Detecting Isotope, Adduct and Homologue Relations in LC-MS Data

Package: nontarget
Type: Package
Title: Detecting Isotope, Adduct and Homologue Relations in LC-MS Data
Version: 1.8
Date: 2016-03-14
Author: Martin Loos
Maintainer: Martin Loos <Martin.Loos@eawag.ch>
Description: Screening a HRMS data set for peaks related by (1) isotope patterns, (2) different adducts of the same molecule and/or (3) homologue series. The resulting isotopic pattern and adduct groups can then be combined to so-called components, with homologue series information attached. Also allows plotting and filtering HRMS data for mass defects, frequent m/z distances and components vs. non-components.
License: GPL-3
Depends: enviPat (>= 1.9), nontargetData (>= 1.1), mgcv (>= 1.7-22)
NeedsCompilation: yes
Packaged: 2016-03-14 12:31:10 UTC; uchemadmin
Repository: CRAN
Date/Publication: 2016-03-14 15:23:51

● Data Source: CranContrib
● 0 images, 18 functions, 1 datasets
● Reverse Depends: 0

labdsv : Ordination and Multivariate Analysis for Ecology

Package: labdsv
Version: 1.8-0
Date: 2016-01-21
Title: Ordination and Multivariate Analysis for Ecology
Author: David W. Roberts <droberts@montana.edu>
Maintainer: David W. Roberts <droberts@montana.edu>
Depends: R (>= 2.10), mgcv, MASS, cluster
Suggests: optpart
Description: A variety of ordination and community analyses
useful in analysis of data sets in community ecology.
Includes many of the common ordination methods, with
graphical routines to facilitate their interpretation,
as well as several novel analyses.
License: GPL (>= 2)
URL: http://ecology.msu.montana.edu/labdsv/R
Packaged: 2016-01-23 16:20:16 UTC; dvrbts
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2016-01-24 15:45:28

● Data Source: CranContrib
● Cran Task View: Psychometrics
● 0 images, 38 functions, 2 datasets
Reverse Depends: 3

DSsim : Distance Sampling Simulations

Package: DSsim
Depends: graphics, splancs, mrds, mgcv, shapefiles, methods
Suggests: testthat, parallel, knitr, rmarkdown
Type: Package
Title: Distance Sampling Simulations
Version: 1.0.5
Date: 2016-06-17
LazyLoad: yes
Author: Laura Marshall <lhm@st-and.ac.uk>
Maintainer: Laura Marshall <lhm@st-and.ac.uk>
Description: Performs distance sampling simulations. It repeatedly
generates instances of a user defined population within a given survey
region, generates realisations of a survey design (currently these must
be pregenerated using Distance software <http://distancesampling.org/>) and
simulates the detection process. The data are then analysed
so that the results can be compared for accuracy and precision
across all replications. This will allow users to select survey
designs which will give them the best accuracy and precision
given their expectations about population distribution. Any uncertainty in
population distribution or population parameters can be included by running
the different survey designs for a number of different population
descriptions. An example simulation can be found in the help file
for make.simulation.
License: GPL (>= 2)
Collate: 'DDF.Data.R' 'generic.functions.R' 'DDF.Analysis.R'
'DS.Analysis.R' 'Survey.Design.R' 'PT.Design.R'
'PT.Systematic.Design.R' 'PT.Random.Design.R' 'LT.Design.R'
'LT.User.Specified.Design.R' 'LT.EqSpace.ZZ.Design.R'
'LT.EqAngle.ZZ.Design.R' 'LT.Random.Design.R'
'LT.Systematic.Design.R' 'Density.R' 'Population.Description.R'
'Region.R' 'Region.Table.R' 'Sample.Table.R' 'Obs.Table.R'
'Single.Obs.DDF.Data.R' 'Transect.R' 'Line.Transect.R'
'Detectability.R' 'Population.R' 'LT.Survey.Results.R'
'Survey.Results.R' 'DSM.Analysis.R' 'Simulation.R'
'Class.Constructors.R' 'Design.Summary.R' 'Survey.R'
'LT.Survey.R' 'Point.Transect.R' 'PT.Survey.R'
'Population.Summary.R' 'Simulation.Summary.R'
'Single.Obs.LT.Survey.R' 'Single.Obs.PT.Survey.R'
'accumulate.PP.results.R' 'add.dist.error.R'
'add.summary.results.R' 'calc.area.R'
'calc.poss.detect.dists.lines.R'
'calc.poss.detect.dists.points.R' 'check.intersection.R'
'check.shapefile.R' 'coords.from.shapefile.R' 'create.bins.R'
'data.for.distance.R' 'description.summary.R'
'generate.pop.D.R' 'generate.pop.N.R' 'get.ave.density.R'
'get.bound.box.R' 'get.line.sampler.info.R'
'get.point.sampler.info.R' 'get.shapefile.names.R'
'get.surface.constant.R' 'get.surface.gam.R' 'hn.detect.R'
'hr.detect.R' 'in.polygons.R' 'is.gap.R'
'modify.strata.for.analysis.R' 'rename.duplicates.R'
'save.sim.results.R' 'simulate.detections.R'
'single.simulation.loop.R' 'store.ddf.results.R'
'store.dht.results.R' 'uf.detect.R'
RoxygenNote: 5.0.1
NeedsCompilation: no
Packaged: 2016-06-20 11:13:22 UTC; laura
Repository: CRAN
Date/Publication: 2016-06-20 20:25:41

● Data Source: CranContrib
2 images, 62 functions, 1 datasets
● Reverse Depends: 0