HTSFilter : Filter replicated high-throughput transcriptome sequencing data

Package: HTSFilter
Type: Package
Title: Filter replicated high-throughput transcriptome sequencing data
Version: 1.12.0
Date: 2015-03-04
Author: Andrea Rau, Melina Gallopin, Gilles Celeux, and Florence
Jaffrezic
Maintainer: Andrea Rau <andrea.rau@jouy.inra.fr>
Depends: methods, Biobase (>= 2.27.3), R (>= 3.2)
Imports: DESeq (>= 1.19.0), edgeR (>= 3.9.14), DESeq2 (>= 1.6.3)
Suggests: EDASeq (>= 2.1.4), BiocStyle
Description: This package implements a filtering procedure for
replicated transcriptome sequencing data based on a global
Jaccard similarity index in order to identify genes with low,
constant levels of expression across one or more experimental
conditions.
License: Artistic-2.0
LazyLoad: yes
biocViews: Sequencing, RNASeq, Preprocessing, DifferentialExpression,
GeneExpression, Normalization
NeedsCompilation: no
Packaged: 2016-05-04 04:51:03 UTC; biocbuild