PSCBS : Analysis of Parent-Specific DNA Copy Numbers

Package: PSCBS
Version: 0.61.0
Depends: R (>= 3.1.2), utils
Imports: R.methodsS3 (>= 1.7.0), R.oo (>= 1.19.0), R.utils (>= 2.2.0),
R.cache (>= 0.12.0), matrixStats (>= 0.50.1), DNAcopy (>=
1.40.0), listenv (>= 0.6.0), future (>= 0.11.0), parallel
Suggests: Hmisc (>= 3.16-0), R.rsp (>= 0.21.0), R.devices (>= 2.13.2),
ggplot2 (>= 1.0.1), aroma.light (>= 2.2.1)
SuggestsNote: BioC (>= 3.0), Recommended: Hmisc, aroma.light
VignetteBuilder: R.rsp
Date: 2016-02-03
Title: Analysis of Parent-Specific DNA Copy Numbers
Authors@R: c(
person("Henrik", "Bengtsson", role=c("aut", "cre", "cph"),
email="henrikb@braju.com"),
person("Pierre", "Neuvial", role="aut"),
person("Venkatraman E.", "Seshan", role="aut"),
person("Adam B.", "Olshen", role="aut"),
person("Paul T.", "Spellman", role="aut"),
person("Richard A.", "Olshen", role="aut"))
Description: Segmentation of allele-specific DNA copy number data and detection of regions with abnormal copy number within each parental chromosome. Both tumor-normal paired and tumor-only analyses are supported.
License: GPL (>= 2)
LazyLoad: TRUE
ByteCompile: TRUE
biocViews: aCGH, CopyNumberVariants, SNP, Microarray, OneChannel,
TwoChannel, Genetics
URL: https://github.com/HenrikBengtsson/PSCBS
BugReports: https://github.com/HenrikBengtsson/PSCBS/issues
NeedsCompilation: no
Packaged: 2016-02-04 00:30:07 UTC; hb
Author: Henrik Bengtsson [aut, cre, cph],
Pierre Neuvial [aut],
Venkatraman E. Seshan [aut],
Adam B. Olshen [aut],
Paul T. Spellman [aut],
Richard A. Olshen [aut]
Maintainer: Henrik Bengtsson <henrikb@braju.com>
Repository: CRAN
Date/Publication: 2016-02-04 11:27:36