Package: TFMPvalue
Version: 0.0.6
Date: 2015-11-27
Title: Efficient and Accurate P-Value Computation for Position Weight
Matrices
Description: In putative Transcription Factor Binding Sites (TFBSs)
identification from sequence/alignments,
we are interested in the significance of certain match score.
TFMPvalue provides the accurate calculation of P-value with
score threshold for Position Weight Matrices,
or the score with given P-value.
This package is an interface to code originally made available by
Helene Touzet and Jean-Stephane Varre, 2007,
Algorithms Mol Biol:2, 15.
Author: Ge Tan <ge.tan09@imperial.ac.uk>
Maintainer: Ge Tan <ge.tan09@imperial.ac.uk>
Copyright: 2007 LIFL-USTL-INRIA
Imports: Rcpp (>= 0.11.1)
Depends: R (>= 3.0.1)
Suggests: testthat
LinkingTo: Rcpp
License: GPL-2
URL: https://github.com/ge11232002/TFMPvalue
BugReports: https://github.com/ge11232002/TFMPvalue/issues
Type: Package
NeedsCompilation: yes
LazyData: yes
Collate: TFMPvalue-sc2pv.R TFMPvalue-pv2sc.R TFMPvalue-lazyScore.R
util.R
Packaged: 2015-11-29 10:04:42 UTC; gtan
Repository: CRAN
Date/Publication: 2015-11-29 19:19:46
providing 
.