genomeIntervals : Operations on genomic intervals

Package: genomeIntervals
Version: 1.28.0
Date: 2015-07-15
Type: Package
Title: Operations on genomic intervals
Author: Julien Gagneur <gagneur@genzentrum.lmu.de>, Joern Toedling, Richard Bourgon, Nicolas Delhomme
Maintainer: Julien Gagneur <gagneur@genzentrum.lmu.de>
Depends: R (>= 2.15.0), methods, intervals (>= 0.14.0), BiocGenerics
(>= 0.15.2)
Imports: GenomeInfoDb (>= 1.5.8), GenomicRanges (>= 1.21.16),
IRanges (>= 2.3.14), S4Vectors (>= 0.7.10)
Suggests:
Description:
This package defines classes for representing genomic intervals
and provides functions and methods for working with these.
Note: The package provides the basic infrastructure for and is
enhanced by the package 'girafe'.
License: Artistic-2.0
Collate: AllGenerics.R Genome_intervals-class.R
Genome_intervals-coercion-methods.R Genome_intervals-package.R
Genome_intervals-ordering.R show-methods.R size-methods.R c.R
core_annotated.R distance_to_nearest-methods.R
interval_complement-methods.R interval_overlap-methods.R
interval_intersection-methods.R interval_union-methods.R
which_nearest-methods.R parseGffAttributes.R readGff3.R
writeGff3.R
biocViews: DataImport, Infrastructure, Genetics
LazyLoad: yes
NeedsCompilation: no
Packaged: 2016-05-04 03:12:21 UTC; biocbuild