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Package: methylPipe
Type: Package
Title: Base resolution DNA methylation data analysis
Version: 1.6.2
Date: 2016-03-16
Author: Kamal Kishore
Maintainer: Kamal Kishore <kamal.fartiyal84@gmail.com>
Description: Memory efficient analysis of base resolution DNA methylation data in both
the CpG and non-CpG sequence context. Integration of DNA methylation data derived from
any methodology providing base- or low-resolution data.
License: GPL(>=2)
LazyLoad: yes
Imports: marray, gplots, IRanges, BiocGenerics, Gviz,
GenomicAlignments, Biostrings, parallel, data.table,
GenomeInfoDb, S4Vectors
Depends: R (>= 3.2.0), methods, grDevices, graphics, stats, utils,
GenomicRanges, SummarizedExperiment (>= 0.2.0), Rsamtools
Suggests: BSgenome.Hsapiens.UCSC.hg18,
TxDb.Hsapiens.UCSC.hg18.knownGene, knitr, MethylSeekR
VignetteBuilder: knitr
biocViews: MethylSeq, DNAMethylation, Coverage, Sequencing
NeedsCompilation: yes
Packaged: 2016-05-16 04:49:45 UTC; biocbuild
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providing 
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