Package: tximport
Version: 1.0.3
Title: Import and summarize transcript-level estimates for gene-level
analysis
Description: Imports transcript-level abundance, estimated counts and
transcript lengths, and summarizes into matrices for use with
downstream gene-level analysis packages. Average transcript
length, weighted by sample-specific transcript abundance
estimates, is provided as a matrix which can be used as an
offset for different expression of gene-level counts.
Author: Michael Love, Charlotte Soneson, Mark Robinson
Maintainer: Michael Love <michaelisaiahlove@gmail.com>
License: GPL (>=2)
VignetteBuilder: knitr
Imports: utils
Suggests: knitr, testthat, tximportData,
TxDb.Hsapiens.UCSC.hg19.knownGene, readr (>= 0.2.2), limma,
edgeR, DESeq2 (>= 1.11.6)
biocViews: RNASeq, Transcription, GeneExpression, DataImport
RoxygenNote: 5.0.1
NeedsCompilation: no
Packaged: 2016-06-19 05:53:15 UTC; biocbuild
● Data Source:
BioConductor
● BiocViews: DataImport, GeneExpression, RNASeq, Transcription
●
0 images,
1 functions,
0 datasets
●
Reverse Depends: 0
|