Scatterplot of ExpressionSet object

Description

Create a smooth scatterplot with correlation

Usage

    eSetScatterPlot(xSet)

Arguments

Details

Scatterplot and correlations of all data sets in ExpressionSet object

Value

No useful return. The function is called for its side effect to produce the scatterplot.

Author(s)

Bettina Fischer

See Also

plot, smoothScatter

Examples

    dataPath <- system.file("data", package = "SimBindProfiles")
    load(file.path(dataPath, "SGR.RData"))
    eSetScatterPlot(SGR)

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
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Type 'demo()' for some demos, 'help()' for on-line help, or
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> library(SimBindProfiles)
Loading required package: Ringo
Loading required package: Biobase
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, cbind, colnames, do.call, duplicated, eval, evalq,
    get, grep, grepl, intersect, is.unsorted, lapply, lengths, mapply,
    match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank,
    rbind, rownames, sapply, setdiff, sort, table, tapply, union,
    unique, unsplit

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: RColorBrewer
Loading required package: limma

Attaching package: 'limma'

The following object is masked from 'package:BiocGenerics':

    plotMA

Loading required package: Matrix
Loading required package: grid
Loading required package: lattice
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/SimBindProfiles/eSetScatterPlot.Rd_%03d_medium.png", width=480, height=480)
> ### Name: eSetScatterPlot
> ### Title: Scatterplot of ExpressionSet object
> ### Aliases: eSetScatterPlot
> 
> ### ** Examples
> 
>     dataPath <- system.file("data", package = "SimBindProfiles")
>     load(file.path(dataPath, "SGR.RData"))
>     eSetScatterPlot(SGR)
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>