cMap2 Data Package

Description

Data package to provide default ranked profiles, clusters and Cytoscape http://www.cytoscape.org/ file format for the DrugVsDisease package. The data is from drug screenings in the connectivity map (version 2) which is a project based at the Broad Institute of MIT and Harvard in Cambridge, Massachusetts (USA).

Details

Data loaded automatically in the DrugVsDisease package.

Author(s)

C. Pacini

Maintainer: Julio Saez-Rodriguezsaezrodriguez@ebi.ac.uk

References

Drug Profiles: http://www.broadinstitute.org/cmap/ Disease Profiles: http://www.ncbi.nlm.nih.gov/geo/

Examples

#load the gene Ranked lists:
data(drugRL)

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(cMap2data)
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/cMap2data/cMap2data-package.Rd_%03d_medium.png", width=480, height=480)
> ### Name: cMap2data-package
> ### Title: cMap2 Data Package
> ### Aliases: cMap2data-package cMap2data
> ### Keywords: package
> 
> ### ** Examples
> 
> #load the gene Ranked lists:
> data(drugRL)
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>