Last data update: 2014.03.03

R: Plots the NNTS density
nntsplotR Documentation

Plots the NNTS density

Description

Plots the NNTS density

Usage

nntsplot(cpars = 1/sqrt(2 * pi), M = 0, ...)

Arguments

cpars

Vector of complex numbers of dimension M+1. The first element is a real and positive number. The sum of the SQUARED moduli of the c parameters must be equal to 1/(2*pi).

M

Number of components in the NNTS

...

Arguments passed to the function curve

Examples

data(Turtles_radians)
#Empirical analysis of data
Turtles_hist<-hist(Turtles_radians,breaks=10,freq=FALSE)
#Estimation of the NNTS density with 3 componentes for data
est<-nntsmanifoldnewtonestimation(Turtles_radians,3)
est
#plot the estimated density
nntsplot(est$cestimates[,2],3)
#add the histogram to the estimated density plot
plot(Turtles_hist, freq=FALSE, add=TRUE)

Results


R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

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Type 'demo()' for some demos, 'help()' for on-line help, or
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> library(CircNNTSR)

Attaching package: 'CircNNTSR'

The following object is masked from 'package:grDevices':

    trans3d

> png(filename="/home/ddbj/snapshot/RGM3/R_CC/result/CircNNTSR/nntsplot.Rd_%03d_medium.png", width=480, height=480)
> ### Name: nntsplot
> ### Title: Plots the NNTS density
> ### Aliases: nntsplot
> 
> ### ** Examples
> 
> data(Turtles_radians)
> #Empirical analysis of data
> Turtles_hist<-hist(Turtles_radians,breaks=10,freq=FALSE)
> #Estimation of the NNTS density with 3 componentes for data
> est<-nntsmanifoldnewtonestimation(Turtles_radians,3)
> est
$cestimates
  k              cestimates
1 0  0.28645175+0.00000000i
2 1  0.11655438-0.12669303i
3 2 -0.14659000-0.16080633i
4 3  0.01079598+0.00065866i

$loglik
[1] -107.9374

$AIC
[1] 227.8749

$BIC
[1] 241.8593

$gradnormerror
[1] 2.466083e-08

> #plot the estimated density
> nntsplot(est$cestimates[,2],3)
> #add the histogram to the estimated density plot
> plot(Turtles_hist, freq=FALSE, add=TRUE)
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>