integer(1), maximum number of columns on a line used in
printing. See options.
short.fignames
logical(1), indicates whether incfig
figures should be inserted and referred to using short names equal to
corresponding code chunk labels without any additional prefix.
fig.path
character(1), custom prefix to be used for figure file
names when used with knitr; has no effect when compiled with
Sweave. For details see opts_chunk.
error
logical(1), behavior of knitr when errors occur in
vignette code chunks, has no effect when compiled with
Sweave. The default (FALSE) means that errors stop
vignette processing, which is appropriate when packages are being
built and checked. For details see opts_chunk.
use.unsrturl
logical(1), indicating that the ‘unsrturl’
style will be used (ibliographystyle command not
required).
Details
Use is described in the ‘Bioconductor LaTeX Style’ vignette.
By default the 'unsrturl' bibliography style is used, which
automatically creates links to URL, DOIs, etc. Use a different
bibliographystyle with use.unsrturl=FALSE and standard
LaTeX commands for styling bibliographies.
Value
The return value is a character string directing LaTex to use the
Bioconductor style file.
A side effect is setting any options specified as arguments.
Author(s)
Martin Morgan mtmorgan@fhcrc.org, Andrzej Ole<c3><85><c2><9b>, Wolfgang Huber
Examples
## location of the .sty file
BiocStyle:::bioconductor.sty
Results
R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(BiocStyle)
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/BiocStyle/latex.Rd_%03d_medium.png", width=480, height=480)
> ### Name: latex
> ### Title: Use Bioconductor styles to format LaTeX vignettes
> ### Aliases: latex
> ### Keywords: manip
>
> ### ** Examples
>
> ## location of the .sty file
> BiocStyle:::bioconductor.sty
[1] "/home/ddbj/local/lib64/R/library/BiocStyle/resources/tex/Bioconductor.sty"
>
>
>
>
>
> dev.off()
null device
1
>