Last data update: 2014.03.03

R: Use Bioconductor CSS style to format HTML vignettes
markdownR Documentation

Use Bioconductor CSS style to format HTML vignettes

Description

This function sets the Bioconductor style sheet to provide a consistent style across Bioconductor HTML vignettes.

Usage

markdown(css.files, self.contained = TRUE, links.target = TRUE)

Arguments

css.files

character vector containing the location of additional .css files.

self.contained

logical(1), should the content of the CSS stylesheet files be included into the html file or should they be saved as separate files.

links.target

logical(1), should external links open in new browser tab/window.

Details

Use is described in the ‘Bioconductor CSS Style’ vignette.

Value

No value is returned. The function is called for its side effect of setting the markdown and/or knitr specific options controlling the inclusion of the Bioconductor CSS style file in the HTML output.

Author(s)

Andrzej Ole<c3><85><c2><9b> <andrzej.oles@embl.de>, 2014-2015

Examples

## location of the .css file
BiocStyle:::bioconductor.css

Results


R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(BiocStyle)
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/BiocStyle/markdown.Rd_%03d_medium.png", width=480, height=480)
> ### Name: markdown
> ### Title: Use Bioconductor CSS style to format HTML vignettes
> ### Aliases: markdown
> ### Keywords: manip
> 
> ### ** Examples
> 
> ## location of the .css file
> BiocStyle:::bioconductor.css
[1] "/home/ddbj/local/lib64/R/library/BiocStyle/resources/html/bioconductor.css"
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>