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Last data update: 2014.03.03

R: Test the parameter NumberThreshold

TestNumberThreshold

R Documentation

Test the parameter NumberThreshold

Description

This function check the parameter NumberThreshold

Usage

TestNumberThreshold(MaxOrder, NumberThreshold)

Arguments

`MaxOrder`	numeric. The considered maximum order of epistatic interactions. It must be setted as 1, 2, 3, 4, or 5.
`NumberThreshold`	character. It controls the numbers of detected SNPs or SNP-combinations with the help of RatioThreshold. The length of NumberThreshold is equal to MaxOrder. Each element is an integer with the character format.

Value

None

Author(s)

Junliang Shang shangjunliang110@163.com

References

None

Examples

MaxOrder <- 3
NumberThreshold <- c("5","20","10")
TestNumberThreshold(MaxOrder, NumberThreshold)

Results


R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

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> library(CINOEDV)
Loading required package: R.matlab
R.matlab v3.5.1 (2016-03-27) successfully loaded. See ?R.matlab for help.

Attaching package: 'R.matlab'

The following objects are masked from 'package:base':

    getOption, isOpen

Loading required package: igraph

Attaching package: 'igraph'

The following objects are masked from 'package:stats':

    decompose, spectrum

The following object is masked from 'package:base':

    union

Loading required package: ggplot2
Loading required package: reshape2
> png(filename="/home/ddbj/snapshot/RGM3/R_CC/result/CINOEDV/TestNumberThreshold.Rd_%03d_medium.png", width=480, height=480)
> ### Name: TestNumberThreshold
> ### Title: Test the parameter NumberThreshold
> ### Aliases: TestNumberThreshold
> 
> ### ** Examples
> 
> MaxOrder <- 3
> NumberThreshold <- c("5","20","10")
> TestNumberThreshold(MaxOrder, NumberThreshold)
   The NumberThreshold : 5 20 10 

> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>