Coverage visualization package for R

Description

Package for the generation of coverage profiles using data originated in different types of NGS experiments

Details

This package provides a framework for the visualization of genome coverage profiles.

It can be used for ChIP-seq experiments, but it can be also used for nucleosome or RNA-seq experiments or whatever type of experiment where one can produce an aligment in the BAM or WIG/BigWIG formats

Author(s)

Ernesto Lowy

Maintainer: Ernesto Lowy <ernestolowy@gmail.com>

References

BAM format specification: http://samtools.sourceforge.net/SAMv1.pdf

WIG format specification: https://genome.ucsc.edu/FAQ/FAQformat.html

Results