Last data update: 2014.03.03

R: Distribution of pvalues by expression range
degMeanR Documentation

Distribution of pvalues by expression range

Description

Distribution of pvalues by expression range

Usage

degMean(pvalues,counts)

Arguments

pvalues

pvalues of DEG analysis

counts

matrix with counts for each samples and each gene. row number should be the same length than pvalues vector.

Value

ggplot2 object

Examples

data(DEGreportSet)
degMean(DEGreportSet$deg[,4],DEGreportSet$counts)

Results


R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

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> library(DEGreport)
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/DEGreport/degMean.Rd_%03d_medium.png", width=480, height=480)
> ### Name: degMean
> ### Title: Distribution of pvalues by expression range
> ### Aliases: degMean
> 
> ### ** Examples
> 
> data(DEGreportSet)
> degMean(DEGreportSet$deg[,4],DEGreportSet$counts)
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>