Parameters ctrLbls, ctrlClrs, ctrlLgnd and
lims are optional.
ctrlLbls
A numeric vector with the control labels or a string
specifying one of 'height', 'azimuth' or 'both' solar covarites. By
default, for a binClstPath_instance it is set to the solar height
covariate, regardless it has been used or not for the clustering.
ctrlClrs
A vector of colors to depict the control labelling. At least
one colour should be specified for each different control label. By default
white/grey colours are used for the default control labels.
ctrlLgnd
A vector of strings identifying the labels for the legend of
the plot. They are automatically generated for the solar covariates.
lims
A numeric vector with lower and upper bounds to limit the plot.
Examples
# -- apply EMbC to code{expth} --
mybcp <- stbc(expth)
# -- plot the labeling profile against 'both' solar covariates --
chkp(mybcp,ctrlLbls='both',ctrlClrs=RColorBrewer::brewer.pal(8,'Oranges')[1:4])
Results
R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
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> library(EMbC)
Loading required package: move
Loading required package: geosphere
Loading required package: sp
Loading required package: raster
Loading required package: rgdal
rgdal: version: 1.1-10, (SVN revision 622)
Geospatial Data Abstraction Library extensions to R successfully loaded
Loaded GDAL runtime: GDAL 1.11.3, released 2015/09/16
Path to GDAL shared files: /usr/share/gdal/1.11
Loaded PROJ.4 runtime: Rel. 4.9.2, 08 September 2015, [PJ_VERSION: 492]
Path to PROJ.4 shared files: (autodetected)
Linking to sp version: 1.2-3
> png(filename="/home/ddbj/snapshot/RGM3/R_CC/result/EMbC/chkp.Rd_%03d_medium.png", width=480, height=480)
> ### Name: chkp
> ### Title: Check labeling profile
> ### Aliases: chkp chkp,binClst-method
>
> ### ** Examples
>
> # -- apply EMbC to code{expth} --
> mybcp <- stbc(expth)
... computing starting delimiters:
... delimiter lL : 1.488106
... delimiter lH : 1.488106
... delimiter hL : 1.488106
... delimiter hH : 1.488106
... delimiter Ll : 1.982173
... delimiter Lh : 1.982173
... delimiter Hl : 0.8682456
... delimiter Hh : 0.8682456
[1] 0 -0.0000e+00 4 600
[1] 1 -4.2724e+00 4 437
[1] 2 -4.1181e+00 4 35
[1] 3 -3.6766e+00 4 34
[1] 4 -3.2744e+00 4 24
[1] 5 -3.1224e+00 4 21
[1] 6 -3.0675e+00 4 15
[1] 7 -3.0520e+00 4 7
[1] 8 -3.0456e+00 4 4
[1] 9 -3.0416e+00 4 0
[1] 10 -3.0395e+00 4 0
[1] 11 -3.0384e+00 4 0
[1] 12 -3.0379e+00 4 0
[1] 13 -3.0377e+00 4 0
[1] 14 -3.0376e+00 4 0
[1] ... Stable clustering
> # -- plot the labeling profile against 'both' solar covariates --
> chkp(mybcp,ctrlLbls='both',ctrlClrs=RColorBrewer::brewer.pal(8,'Oranges')[1:4])
>
>
>
>
>
> dev.off()
null device
1
>
providing 
.