Class "nongeno"

Description

Class contains all information needed to generate a kernel matrix for non-genotype data.

Objects from the Class

Objects can be created by calls of the form new("nongeno", ...).

Slots

mat:

Object of class "matrix or NULL"; design matrix.

kernel:

Object of class "character"; type of kernel to generate.

weights:

Object of class "matrix"; weights to be used when generating kernel matrix.

Methods

No methods defined with class "nongeno" in the signature.

Note

This class is used to simplify input for and logic within the main program. New objects of this class should be created only through function nongeno().

Author(s)

Shannon T. Holloway

See Also

geno, nongeno

Examples

showClass("nongeno")

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(FastKM)
Loading required package: rARPACK

FastKM was developed in support of IMPACT, a comprehensive research
program that aims to improve the health and longevity of people by
improving the clinical trial process. To learn more about our 
research and available software visit www.impact.unc.edu. 


> png(filename="/home/ddbj/snapshot/RGM3/R_CC/result/FastKM/nongeno-class.Rd_%03d_medium.png", width=480, height=480)
> ### Name: nongeno-class
> ### Title: Class '"nongeno"'
> ### Aliases: nongeno-class
> ### Keywords: classes
> 
> ### ** Examples
> 
> showClass("nongeno")
Class "nongeno" [package "FastKM"]

Slots:
                                                   
Name:             mat         kernel        weights
Class: matrix or NULL      character         matrix
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>