Last data update: 2014.03.03

R: Histogram with exact number of bins specified by the user
histsuR Documentation

Histogram with exact number of bins specified by the user

Description

The generic function histsu computes a histogram of the given data values.

Usage

histsu(x, breaks = "Sturges", freq = NULL, probability = !freq, 
include.lowest = TRUE, right = TRUE, density = NULL, angle = 45, col = NULL, 
border = NULL, main = paste("Histogram of", xname), xlim = range(breaks), 
ylim = NULL, xlab = xname, ylab, axes = TRUE, plot = TRUE, labels = FALSE, 
nclass = NULL, ...)

Arguments

x

A vector of values for which the histogram is desired.

breaks

Either: 1) A vector giving the breakpoints between histogram cells, OR 2) A single number giving the number of cells for the histogram, OR 3) A character string naming an algorithm to compute the number of cells (see Details), OR 4) A function to compute the number of cells.

freq

logical; if TRUE, the histogram graphic is a representation of frequencies, the counts component of the result; if FALSE, probability densities, component 'density', are plotted (so that the histogram has a total area of one). Defaults to TRUE iff 'breaks' are equidistant (and 'probability' is not specified).

probability

A logical value, TRUE means it is not a frequency graph.

include.lowest

If TRUE, an x[i] equal to the 'breaks' value will be included in the first (or last, for right=FALSE) bar. This will be ignored (with a warning) unless 'breaks' is a vector.

right

If TRUE, the histograms cells are right-closed (left open) intervals.

density

The density of shading lines, in lines per inch. The default value of NULL means that no shading lines are drawn. Non-positive values of 'density' also inhibit the drawing of shading lines.

angle

The slope of shading lines, given as an angle in degrees (counter-clockwise).

col

A colour to be used to fill the bars. The default of NULL yields unfilled bars.

border

The color of the border around the bars. The default is to use the standard foreground color.

main

Title of the graph.

xlim

A two valued vector specifying the lower and upper limits of the x axis.

ylim

A two valued vector specifying the lower and upper limits of the y axis.

xlab

X axis labels.

ylab

Y axis labels.

axes

Logical value, if TRUE, axis will be drawn.

plot

Logical value, if TRUE, plot will be drawn.

labels

Logical or character. Additionally draw labels on top of bars, if not FALSE; see plot.histogram.

nclass

Number of bins of the histogram.

...

Other graphical parameters, see par for details.

Details

See hist help file. This function forces the number of class of histogram to that as specified by the user.

Value

An object of class "histogram" which is a list with components:

breaks

The n+1 cell boundaries (=breaks if that was a vector).

counts

N integers; for each cell, the number of x[] inside.

density

Values as estimated density values. If all(diff(breaks) == 1), they are the relative frequencies counts/n.

intensities

Same as density, deprecated.

mids

The n cell midpoints.

xname

A character string with the actual x argument name.

equidist

Logical, indicating if the distances between breaks are all the same.

Note

Please see hist help file.

Author(s)

R development team with modifications by Steve Su

References

Venables, W. N. and Ripley. B. D. (2002) Modern Applied Statistics with S. Springer.

See Also

hist

Examples

# See hist for extended example:
junk<-rgamma(1000,5)
# Forcing the number of bins to be 10:
histsu(junk,nclass=10)

Results


R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(GLDEX)
Loading required package: cluster
> png(filename="/home/ddbj/snapshot/RGM3/R_CC/result/GLDEX/histsu.Rd_%03d_medium.png", width=480, height=480)
> ### Name: histsu
> ### Title: Histogram with exact number of bins specified by the user
> ### Aliases: histsu
> ### Keywords: hplot
> 
> ### ** Examples
> 
> # See hist for extended example:
> junk<-rgamma(1000,5)
> # Forcing the number of bins to be 10:
> histsu(junk,nclass=10)
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>