Computes Benjamini-Hochberg (95) q-value

Description

Computes Benjamini-Hochberg (95) q-value

Usage

qvaluebh95(p, fdrate=0.1)

Arguments

Value

A list containing

Author(s)

Yurii Aulchenko

Examples

require(GenABEL.data)
data(srdta)
a<-qtscore(qt2,data=srdta)
qv <- qvaluebh95(a[,"P1df"])
plot(a[,"Position"],-log10(qv$qvalue))

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

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Type 'demo()' for some demos, 'help()' for on-line help, or
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> library(GenABEL)
Loading required package: MASS
Loading required package: GenABEL.data
> png(filename="/home/ddbj/snapshot/RGM3/R_CC/result/GenABEL/qvaluebh95.Rd_%03d_medium.png", width=480, height=480)
> ### Name: qvaluebh95
> ### Title: Computes Benjamini-Hochberg (95) q-value
> ### Aliases: qvaluebh95
> ### Keywords: htest
> 
> ### ** Examples
> 
> require(GenABEL.data)
> data(srdta)
> a<-qtscore(qt2,data=srdta)
> qv <- qvaluebh95(a[,"P1df"])
> plot(a[,"Position"],-log10(qv$qvalue))
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>