Demo genomic features around the TP53 gene

Description

Build the genomic features of the TP53 demo region

Usage

TP53GenomicFeatures()

Details

Returns a list of genomic features (gene, exons, transcripts) annotating a region of UCSC hg19 sequence centered on the region of the TP53 gene, with 1 Mb flanking sequence on each side. This is intended as a test/demonstration to run the NGS pipeline in conjunction with the LungCancerLines data package.

Value

A list of GRanges objects containing the genomic features

Author(s)

Gregoire Pau

See Also

TP53Genome, buildGenomicFeaturesFromTxDb, runPipeline

Results