R: Macroevolutionary phylogentic analysis of species trees and...
HyPhy-package
R Documentation
Macroevolutionary phylogentic analysis of species trees and gene trees
Description
A Bay Area high level phylogenetic analysis package mostly using the birth-death process.
Analysis of species tree branching times and simulation of species trees
under a number of different time variable birth-death processes.
Analysis of gene tree species tree reconciliations and simulations of gene trees in species trees under the birth-death process.