Last data update: 2014.03.03

R: Autosomal dominant pedigree
dominant1R Documentation

Autosomal dominant pedigree

Description

A three generation pedigree affected with an autosomal dominant disorder.

Usage

dominant1

Format

A data frame describing the pedigree in standard LINKAGE format (i.e. the columns are: Family ID, individual ID, father, mother, sex, affection status).

Examples

x = linkdat(dominant1)
plot(x)

Results


R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(IBDsim)
Loading required package: paramlink
Loading required package: kinship2
Loading required package: Matrix
Loading required package: quadprog
> png(filename="/home/ddbj/snapshot/RGM3/R_CC/result/IBDsim/dominant1.Rd_%03d_medium.png", width=480, height=480)
> ### Name: dominant1
> ### Title: Autosomal dominant pedigree
> ### Aliases: dominant1
> ### Keywords: datasets
> 
> ### ** Examples
> 
> x = linkdat(dominant1)
Family ID: 1.
14 individuals.
8 affected 6 non-affected.
4 nuclear subfamilies.
0 markers.

> plot(x)
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>