R: An S4 class to contain all rates and models generated by...
INSPEcT-class
R Documentation
An S4 class to contain all rates and models generated by INSPEcT
Description
INSPEcT is a class able to store all the estimated rates and concentrations (slot ratesFirstGuess),
the modeled rates and concentrations (slot modelRates) and the model themselves (slot model).
Within the class INSPEcT other information regarding the experimental design are stored, such as the time
points where experiments were collected (slot tpts), the labeling time (slot tL) and the normalization scale
fators used for RNA- (totalSF) and 4sU-seq libraries (labeledSF). A list of parameters that will be used during the
modeling process is stored within the slot params and can be accessed by modelingParams.
A new instance of the class INSPEcT can be generated by the constructor function newINSPEcT.