INSPEcT package

Description

INSPEcT (INference of Synthesis, Processing and dEgradation rates in Time-cousre experiments) is a package that analyse 4sU-seq and RNA-seq time-course data in order to evaluate synthesis, processing and degradation rates and asses via modeling the rates that determines changes in mature mRNA levels.

It implements two classes (INSPEcT_model and INSPEcT) and their corresponding methods. To have a detailed description of how the two classes are structured and which methods apply on, type:

?'INSPEcT-class'
?'INSPEcT_model-class'
?'INSPEcT_diffsteady-class'

To see how the typical workflow of INSPEcT works, type:
vignette('INSPEcT')

Last but not least, to obtain a citation, type:
citation('INSPEcT')

Results