Retrieve results of chi-squared test for the selected models

Description

Retrieve results of chi-squared test for the selected models

This method is used to retrieve the chi-squared test results for the models that have been selected to better represent the behavior of each gene.

Usage

chisqmodel(object, ...)

## S4 method for signature 'INSPEcT_model'
chisqmodel(object, ...)

## S4 method for signature 'INSPEcT'
chisqmodel(object, ...)

Arguments

Value

A vector of chi-squared test results

Examples

data('mycerIds10', package='INSPEcT')
chisqmodel(mycerIds10)

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(INSPEcT)
Loading required package: Biobase
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, cbind, colnames, do.call, duplicated, eval, evalq,
    get, grep, grepl, intersect, is.unsorted, lapply, lengths, mapply,
    match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank,
    rbind, rownames, sapply, setdiff, sort, table, tapply, union,
    unique, unsplit

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: BiocParallel
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/INSPEcT/chisqmodel.Rd_%03d_medium.png", width=480, height=480)
> ### Name: chisqmodel
> ### Title: Retrieve results of chi-squared test for the selected models
> ### Aliases: chisqmodel chisqmodel,INSPEcT-method
> ###   chisqmodel,INSPEcT_model-method
> 
> ### ** Examples
> 
> data('mycerIds10', package='INSPEcT')
> chisqmodel(mycerIds10)
 [1] 5.643010e-06 2.441809e-06 1.846811e-05 1.159503e-02 1.031078e-01
 [6] 5.318123e-04 3.303052e-01 9.766616e-04 4.158668e-04 2.258174e-02
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>