R: Scatterplot of bootstrapped results: sd vs correlation
plot.Bootstrap
R Documentation
Scatterplot of bootstrapped results: sd vs correlation
Description
Scatterplot of the sd vs correlation values obtained from the pre-computed Bootstrap object
along with two fitted lines: the first (solid blue) for a bootstrap smooth
and a second (dashed red) for a normal theory formula
Usage
## S3 method for class 'Bootstrap'
plot(x, new.plot=FALSE, file.copy=FALSE, copy.zoom=1, cex.main=1.2, cex.lab=1, cex.axis=1, cex.legend=1, ...)
Arguments
new.plot
logical indicating if the new graphic device should be created for plot. Default is FALSE.
file.copy
logical or a character string indicating if the plot should be saved to a file.
If character string, it's content used as a file name and if TRUE, the default file named is formed and used. Default is FALSE.
cex.main
Main title font size. Default is 1.2.
cex.lab
X and Y titles font size. Default is 1.
cex.axis
X and Y axis labels font size. Default is 1.
cex.legend
plot legend font size. Default is par('cex').
copy.zoom
Zoom factor used when saving plot in a file. Default is 1.
...
Additional graphic parameters
Author(s)
Alex Lisovich, Roger Day
See Also
For more information see Bootstrap.
Examples
examples$bootstrap$plot();
Results
R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(IdMappingAnalysis)
Loading required package: R.oo
Loading required package: R.methodsS3
R.methodsS3 v1.7.1 (2016-02-15) successfully loaded. See ?R.methodsS3 for help.
R.oo v1.20.0 (2016-02-17) successfully loaded. See ?R.oo for help.
Attaching package: 'R.oo'
The following objects are masked from 'package:methods':
getClasses, getMethods
The following objects are masked from 'package:base':
attach, detach, gc, load, save
Loading required package: rChoiceDialogs
Loading required package: rJava
Attaching package: 'rJava'
The following object is masked from 'package:R.oo':
clone
This is rChoiceDialogs 1.0.6 2014-09-05
This is IdMappingAnalysis 1.16.0 2013-05-24
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/IdMappingAnalysis/plot.Bootstrap.Rd_%03d_medium.png", width=480, height=480)
> ### Name: plot.Bootstrap
> ### Title: Scatterplot of bootstrapped results: sd vs correlation
> ### Aliases: plot.Bootstrap Bootstrap.plot plot,Bootstrap-method
> ### Keywords: internal methods
>
> ### ** Examples
>
> examples$bootstrap$plot();
>
>
>
>
>
> dev.off()
null device
1
>
providing 
.