Last data update: 2014.03.03
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R: Class 'UTR3eSet'
UTR3eSet-class | R Documentation |
Class UTR3eSet
Description
An object of class UTR3eSet represents the results of 3UTR usage
Objects from the Class
Objects can be created by calls of the form
new("UTR3eSet", usage, PDUI, PDUI.log2, short, long, signals, testRes)
Slots
usage an GRanges object with CP sites info.
PDUI a matrix of PDUI
PDUI.log2 log2 transformed PDUI matrix
short a matrix of usage of short form
long a matrix of usage of long form
signals signals used for single sample
testRes a matrix of test results of testUsage
Methods
- $, $<-
Get or set the slot of UTR3eSet
- as("UTR3eSet", "ExpressionSet")
Convert a UTR3eSet to an ExpressionSet.
- as("UTR3eSet", "GRanges")
Convert a UTR3eSet to an GRanges.
Author(s)
Jianhong Ou
Results
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